18 homologs were found in PanDaTox collection
for query gene Pden_2018 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_2018  Zinc finger-domain-containing protein  100 
 
 
319 aa  615  1e-175  Paracoccus denitrificans PD1222  Bacteria  normal  0.574059  normal  0.668736 
 
 
-
 
NC_009952  Dshi_3057  MJ0042 family finger-like protein  48.91 
 
 
248 aa  79  0.0000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0479  Zinc finger/thioredoxin putative  35.97 
 
 
274 aa  70.9  0.00000000003  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2450  Zinc finger-domain-containing protein  39.52 
 
 
256 aa  64.7  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.761228  normal  0.24393 
 
 
-
 
NC_009049  Rsph17029_2386  Zinc finger-domain-containing protein  62.16 
 
 
368 aa  61.2  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.814986  normal 
 
 
-
 
NC_007493  RSP_0732  hypothetical protein  62.16 
 
 
304 aa  60.8  0.00000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.738577  n/a   
 
 
-
 
NC_008043  TM1040_3497  Zinc finger/thioredoxin putative  60.53 
 
 
304 aa  60.5  0.00000003  Ruegeria sp. TM1040  Bacteria  normal  normal  0.557897 
 
 
-
 
NC_007643  Rru_A3253  hypothetical protein  44.44 
 
 
361 aa  50.1  0.00006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.2134  n/a   
 
 
-
 
NC_010338  Caul_3216  Zinc finger-domain-containing protein  48.57 
 
 
308 aa  48.5  0.0002  Caulobacter sp. K31  Bacteria  normal  0.639596  normal  0.370858 
 
 
-
 
NC_008347  Mmar10_2373  Zinc finger-domain-containing protein  43.18 
 
 
297 aa  45.4  0.001  Maricaulis maris MCS10  Bacteria  normal  normal  0.202349 
 
 
-
 
NC_009719  Plav_1596  Zinc finger-domain-containing protein  40.54 
 
 
318 aa  45.8  0.001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.889508 
 
 
-
 
NC_007794  Saro_0702  Zinc finger/thioredoxin putative  42.86 
 
 
294 aa  44.7  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0713  hypothetical protein  37.84 
 
 
142 aa  44.7  0.002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1424  Zinc finger-domain-containing protein  38.89 
 
 
635 aa  44.3  0.003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0877101  n/a   
 
 
-
 
NC_013173  Dbac_1855  MJ0042 family finger-like protein  38.33 
 
 
383 aa  44.3  0.003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3390  MJ0042 family finger-like protein  43.59 
 
 
610 aa  43.5  0.005  Anaeromyxobacter sp. K  Bacteria  normal  0.0666747  n/a   
 
 
-
 
NC_013440  Hoch_1839  MJ0042 family finger-like protein  35.9 
 
 
986 aa  43.5  0.005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0213586  normal  0.108328 
 
 
-
 
NC_008576  Mmc1_3605  Zinc finger-domain-containing protein  38.3 
 
 
1244 aa  42.7  0.008  Magnetococcus sp. MC-1  Bacteria  normal  0.188848  normal 
 
 
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