Gene Pden_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1855 
Symbol 
ID4579114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1855663 
End bp1856622 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID639769175 
ProductABC transporter related 
Protein accessionYP_915648 
Protein GI119384592 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.152779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.374801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC CAGAGCAAAG CCCGAACGCC ATCGAAATCA GTGGCCTGAC CAAGACCTAT 
GCCGCCGCCG GCCAGGCGCC GGCGAAACAG GCGCTGAAGG GGCTGGACCT CGCCATCCCC
GCCGGCTCGA TCTTCGGCCT CCTGGGTCCG AACGGCGCCG GGAAATCGAC GACGATCAAT
ATCTTGGCCG GGCTGGTGCG CAAAAGCTCG GGCAAGGTCA GGATCTGGGG CTTCGACCAG
GACGTGAACC CACGCCAGTC CCGCGCCGCC ATCGGCGTCA TGCCGCAAGA GCTGAACATC
GACCCGTTCC TGACCCCTCG CGCCAGCCTT GAGGTGCAGG CGGGGCTCTA CGGCGTGCCG
AAACGCGAAC GCTGGACCGA CGAGCTCCTG GAACTGGTCG GGCTGACCGA ACAGGCGGAA
AGCTATTCGC GCCACCTGTC GGGCGGCATG AAGCGGCGAC TGCTGCTTGC CAAGGCGCTG
GTCCACCGGC CGCAGATCCT GGTGCTGGAC GAACCGACGG CGGGCGTCGA CATCCAGCTG
CGCGAGATGC TGTGGCGCAA CGTGCGCAGG CTGAACGACC AGGGCATGAC CATCATCCTG
ACTACGCATT ACCTGGAAGA GGCCGAGGAG ATGTGCGACC GCATCGCCAT CATCGACCAT
GGCCAGCTGA TCCTGTGCGA GGATACCGCC GCCCTGCTCG GCCGCGCCGA TTCCAAGACG
CTGGTCGTCG ACACGGGCGA GGCCCGCGCC CTGCCTGCCC TGCCAGAGGG CGTGCGGGCC
GAGCGGCGCG AGGACGGCCG GCTCGCGCTC AGCTATGCGC CTTCGCGCAT CCCTGCGGAC
GGGCTGATCG ACGCGCTGCG CGCCGCGGGC CTGCCGATCC GCGACGTCGC GGTCGAAGCA
CCGGATCTCG AGGACGTCTT CGTCCAGCTG ACCTCGCGCC AGGCGCCTCA GCCTGGCTGA
 
Protein sequence
MPAPEQSPNA IEISGLTKTY AAAGQAPAKQ ALKGLDLAIP AGSIFGLLGP NGAGKSTTIN 
ILAGLVRKSS GKVRIWGFDQ DVNPRQSRAA IGVMPQELNI DPFLTPRASL EVQAGLYGVP
KRERWTDELL ELVGLTEQAE SYSRHLSGGM KRRLLLAKAL VHRPQILVLD EPTAGVDIQL
REMLWRNVRR LNDQGMTIIL TTHYLEEAEE MCDRIAIIDH GQLILCEDTA ALLGRADSKT
LVVDTGEARA LPALPEGVRA ERREDGRLAL SYAPSRIPAD GLIDALRAAG LPIRDVAVEA
PDLEDVFVQL TSRQAPQPG