Gene Pden_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1745 
Symbol 
ID4581255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1733439 
End bp1734659 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID639769060 
Productcytochrome B561 
Protein accessionYP_915538 
Protein GI119384482 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein
[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.399847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.227689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCA GCAACACCGC CCGCGCCTAT GGCTGGGTCG CCCGCTTTTT CCACTGGACT 
GTGGCCGTCC TGATCCTGGC CGCCATCGCC GTCGGGCTTT ACGCGGACAA TCTGCCCGAG
GGCGGGGAAT CGCAGCTCCA GGCGATCTTC GCCGCCTACT CGCTGCACAA GACCGTGGGC
ATGGCGGCGC TGGCGCTGGT GGCGCTGCGC ATCCTCTGGA CGCTGACGCA GCCGAAGCCC
CGTCCCCTGC ATCCCGGGCG GCGGCTGGAG ACCCTAGGCG CCGAACTGGT GCATTGGGCG
CTGTGGATCG GCATGATCGT GATGCCGCTG TCGGGCTGGC TGCTGCATTC GGCCGCGCCG
GGCGGCTTTG CCCGCATCCT GTGGCCCTTT GGCCAGCGCC TGCCCTTCGT TCCCGAGGAT
CTGGCGCTTT CCGAGCGCTT CGCGGCCTTT CACGAATTCG GCTGGTGGCT GCTGGCCGGG
TTGATCGCGC TGCATGTCAT TGGCGCGCTG AAACATGCGA TCATCGACCG CGACGGCACG
ATGAACCGCA TGGCCGGCGA TCCCGGCCGC GCGCCCGAGC CTCCGGCTGC GAGGCCCGGC
GTCCTGCCGC ATGTGCTGGC CGCCATGGCC GCGCTGGCGA TCTGGGTGGG GGTCGCCTTC
ATTCCCGCCG GCTCTTCGGA CATGCAGGAA CCGGCCGCTG CCGCATCTGT CCCCGCATCC
ACCCCTGCGA CCGTGCCGGA AGCGGGCTGG GCGGTCGAGC AAGGCACGCT GGAGATCGAG
GTCACGCAGG CCGGCAGTGC GGTCGCGGGC CAGTTCGGAC AATGGCAGGC CGATATCGTC
TACGACCCGG AAAGCCGCAC GGGTCGGGTG GCGGTCAGCG TCGACATCGC CTCTCTTACC
CTGGGCGCAG TCAGCGACGC GGCCAAGGGG CCGGATTTCC TGAATGCCGC CGCCCATCCG
GTCGCCACCT TCGAGGCCGA GATCCTGCCG CCCCCGGCCG AGGACCAGCC GCATGTCGCG
CATGGCCGGC TGACCATCGC GGGCCAGACG ATCGAGACCG ACCTGCCCTT TGCGCTGACA
GTTCAGGACG ATGTGGCGCA GGCGCAGGGA CGGATGCGCG TCGACCGCCG CGATTTCGGC
ATCGGCGCCG GCTATGCCGA CGAAGGCACC GTGGGCTTCG GCGTCGAGAT CGGATTCGCC
CTGAGCGCAA AGCAGCAATA G
 
Protein sequence
MKASNTARAY GWVARFFHWT VAVLILAAIA VGLYADNLPE GGESQLQAIF AAYSLHKTVG 
MAALALVALR ILWTLTQPKP RPLHPGRRLE TLGAELVHWA LWIGMIVMPL SGWLLHSAAP
GGFARILWPF GQRLPFVPED LALSERFAAF HEFGWWLLAG LIALHVIGAL KHAIIDRDGT
MNRMAGDPGR APEPPAARPG VLPHVLAAMA ALAIWVGVAF IPAGSSDMQE PAAAASVPAS
TPATVPEAGW AVEQGTLEIE VTQAGSAVAG QFGQWQADIV YDPESRTGRV AVSVDIASLT
LGAVSDAAKG PDFLNAAAHP VATFEAEILP PPAEDQPHVA HGRLTIAGQT IETDLPFALT
VQDDVAQAQG RMRVDRRDFG IGAGYADEGT VGFGVEIGFA LSAKQQ