Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1722 |
Symbol | |
ID | 4580984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1709821 |
End bp | 1710477 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639769036 |
Product | GntR family transcriptional regulator |
Protein accession | YP_915515 |
Protein GI | 119384459 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.622001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACGA TCCCCAACAC GCTGCGCATC CGCAACGCGC TGGAAAACGC CATCGTGGAG GGCAAGTATC CGCCCGGCGC CCGGCTGGAC CCCGAGGCGC TGGAGCGGGA ATTCGAGGTC TCGCGCACCC CGATCCGCGA GGCGCTGCAC CAGCTGGAAG CCTCGGGACT GGTCCGGGTG GTGCCCAAGC GCGGCACCTT CGTCACCGAA TGGAGCGCGG GCGAGCTGGC CGAGCGATTC GAGGTCATGG CCGAGATCGA GGCGACCTGC GGCCGCCTTG CCGCCCGCCG CATCACCGAG GCGGAGATGG CCGATTTCGA GGCCGTCCAC GAGGCATGCC GCCAATTGGC CGAGGCCGGC GAGGTCGAGG CCTATTACGC CCGCAACTCG GATTTCCACC ATTGCATCTA TCGCGCGACC CACAACGCCT TCCTGGCGCA AGAGGCGGCG CGGCTGCATG CCATGCTGCA ACCCTATCGG CGCATGCAGC TCAAGGTGCG CAACCGGATG ATGCGGTCAT TCGCCGAACA TGACGCGGTG GTGGCGCGCA TCCGTGCCGG CGACGGCGAG GGCGCGGCCC AGGCGCTGCG CATCCATGTC ATCGTGCAGG GCGACCGTTT CCACGACCTG ATCGCGGCCT TGCGGCAAGG GGACTGA
|
Protein sequence | MATIPNTLRI RNALENAIVE GKYPPGARLD PEALEREFEV SRTPIREALH QLEASGLVRV VPKRGTFVTE WSAGELAERF EVMAEIEATC GRLAARRITE AEMADFEAVH EACRQLAEAG EVEAYYARNS DFHHCIYRAT HNAFLAQEAA RLHAMLQPYR RMQLKVRNRM MRSFAEHDAV VARIRAGDGE GAAQALRIHV IVQGDRFHDL IAALRQGD
|
| |