Gene Pden_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1641 
Symbol 
ID4580823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1620953 
End bp1621969 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID639768955 
Producthypothetical protein 
Protein accessionYP_915434 
Protein GI119384378 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA CCATGATCCC TTCGCGCGGC CTGATCGAGG CGGCCTTTCC GGGCTTCGCG 
GTCTCGGCCC TGGTCGCGGC CACGGCGCAG TTCCTGTCCG ACCATTACGG CGCCCCGGCC
ATGCTGCTGG CGCTGCTCCT GGGCCTGGCG CTGAACTTCC TGGCCGAGGA CGGCACCCGC
ACCGCCCCGG GCGTCGCCTT CACCGCGCGC ACCGTGCTGC GGCTGGGGGT GGCGCTCCTG
GGCGCGCGCA TCTCGGCCGG CATGCTGGCG GCGCTGGGGC CCGGCGCCAT CGCGCTGGTG
GCGGCGGGGG TGGTGCTGAC CATCCTCTTC GCGCTCGCCG CCAGCCGGCT GGTCGGCCGC
GGCTGGCGCT TCGCGCTGCT GACCGGCGGC TCGGTGGCGA TCTGCGGCGC CTCGGCGGCC
ATGGCCATCG CCGCGGTGCT GCCGCGCCAC GAGAAATCCG AGCGCGACCT GGTCTTCACC
GTGCTCTCGG TCACCGTGCT CTCGACCGTG GCCATGGTGC TCTATCCGAT GCTGGCCGGG
TTCTTCGGCT TCACCGCGCG CGACAGCGGC GTCTTCCTGG GCGGCACCAT CCACGACGTG
GCCCAGGTGG TCGGCGCCGG CTTCTCGATC GGTCCCGAGG CCGGCGAGAC CGCCACCCTG
GTCAAGCTGA TCCGCGTCTC CATGCTGGCG CCGGTGGTGC TGTGCTTCTC GCTGGCGATC
CGGGCGCGCG GGCTGGCCGA CAGCCGGGGC GGCAAGGCGC CGCCGCTCCT GCCGGGCTTC
GTCATCGGCT TTTTGGTGCT GGCGGCGCTC AACAGCCTGG GGCTGGTGCC GGCCGCGGTC
TCGGAACTGG CCGGCCAGCT CTCCCGCTGG GCGCTGCTGA TCGCCATCGC CGCGGTCGGC
ATCAAGACCT CGCTGAAGAA GATGTTCGAG GTCGGCACCG GCGCCATCGC GCTGATCCTG
GCCGAAACCG TGTTCCTGGC CGTCTTCGTC ACCATCGGCC TGCATGTCCT GGGCTAG
 
Protein sequence
MISTMIPSRG LIEAAFPGFA VSALVAATAQ FLSDHYGAPA MLLALLLGLA LNFLAEDGTR 
TAPGVAFTAR TVLRLGVALL GARISAGMLA ALGPGAIALV AAGVVLTILF ALAASRLVGR
GWRFALLTGG SVAICGASAA MAIAAVLPRH EKSERDLVFT VLSVTVLSTV AMVLYPMLAG
FFGFTARDSG VFLGGTIHDV AQVVGAGFSI GPEAGETATL VKLIRVSMLA PVVLCFSLAI
RARGLADSRG GKAPPLLPGF VIGFLVLAAL NSLGLVPAAV SELAGQLSRW ALLIAIAAVG
IKTSLKKMFE VGTGAIALIL AETVFLAVFV TIGLHVLG