Gene Pden_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1459 
Symbol 
ID4580242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1425006 
End bp1425662 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID639768774 
ProductDSBA oxidoreductase 
Protein accessionYP_915255 
Protein GI119384199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA TCGAATTCTG GTTCGACTTC TCCTCGGGTT ATGCCTTCTT TGCCGCGCAG 
GAGATCGACG CTCTTTCGTC TCGAGTAGGG CGAGCGGTGC TGTGGCGTCC GTACATGCTG
GGTACGGCAT ATAAGGTTAC CGGCGCACGC GGCTTGTCTT CAACACCACT CAAGCGCGAC
TATGCGCGCC GCGACTGGGC CCGCATCGCC GAGCCGCGCG GACTGAGCTT TCACCTGCCA
CCCGAGCATC CGCGCGTGGC ATTGGCCGCC ACCCGCGCCT TCTACTGGAT CGAAACGCAG
AACCCCGACG CCGCTTCAGG GTTCGCGAAG CGGATCTTTG AAGGTTATTT TAGCGAAGGC
CTCGACACTT CATCGCCAGA GGCCGTTGCA GCATTTGCCC TTGAATTCGG ATGTAAACCT
GAGGATTTAC TGGCCGGGAT CATGGATCCC GTCATCAAGG CCCGAACGAC AGAACTTGCC
GAGGACGCGG TGGCGCGGGG TGTCTTCGGT TCACCCTTCT TTCTGGTCGA TGGCGAACCG
TTTTGGGGCT GGGACCGTAT GGGGATGATG GAAGACTGGA TCGGAGCCGC AGGATGCCAG
CCTCTCTTCT CATCCGCACG CTTAAGCCGA ACGATGCGCC GCGGCTGGCC GAGTTGA
 
Protein sequence
MNPIEFWFDF SSGYAFFAAQ EIDALSSRVG RAVLWRPYML GTAYKVTGAR GLSSTPLKRD 
YARRDWARIA EPRGLSFHLP PEHPRVALAA TRAFYWIETQ NPDAASGFAK RIFEGYFSEG
LDTSSPEAVA AFALEFGCKP EDLLAGIMDP VIKARTTELA EDAVARGVFG SPFFLVDGEP
FWGWDRMGMM EDWIGAAGCQ PLFSSARLSR TMRRGWPS