Gene Pden_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1447 
Symbol 
ID4580231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1415738 
End bp1416283 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID639768763 
ProductPEBP family protein 
Protein accessionYP_915244 
Protein GI119384188 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA ACCTAAGCCG TACTGCTCTG TTCTCAATGG CGCTCGCCGC CACTCCCGTT 
GTCGCTCACG CGTTCGATCT GGACAGCCGC GACCTGCGGG AGGGTGAAAC GATCCGCATG
GAATTGGTGA ATTCGACCAT GGGGTGCGAG GGGCTCAACC AATCCCCGCA CCTGGTCTGG
AATGACCCGC CCGCAGGAAC GCAGAGCTTC GCGATTACGG TCTACGACCC GGACGCCCCG
ACCGGCAGCG GTTGGTGGCA CTGGATCGTT CTGGATATTC CGGCGCACAC ACGAGCGATG
CTCGCGGGCG CCTCCGGCTA CCTGCCCGCC CCTCTGGTCG AGTCCCTGAC GGATTTCGGG
CAGCCCGGCT ATGGCGGCCC CTGCCCGCCT GAGGGCGCAG TCGCTCATCG CTACGAGTTC
ACCGTCTATG CCATCGACGT GCCGAGCCTG GGGTTGGACG CCAGTGCCAT GCCCGCCCTC
GCCGGCTACA TGATCCACGC GCACAGCCTC GGCAGTGTGA CACTGACAGC GCGCTACGGG
CGCTGA
 
Protein sequence
MMMNLSRTAL FSMALAATPV VAHAFDLDSR DLREGETIRM ELVNSTMGCE GLNQSPHLVW 
NDPPAGTQSF AITVYDPDAP TGSGWWHWIV LDIPAHTRAM LAGASGYLPA PLVESLTDFG
QPGYGGPCPP EGAVAHRYEF TVYAIDVPSL GLDASAMPAL AGYMIHAHSL GSVTLTARYG
R