Gene Pden_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1446 
Symbol 
ID4580230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1414397 
End bp1415647 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content64% 
IMG OID639768762 
Productmajor facilitator transporter 
Protein accessionYP_915243 
Protein GI119384187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC CAGCCCAATT GTCCCCGTTG CGCCGCATCG TCTTCGTCTC TCTGCCATTC 
ACCTTCGCCT ACCTGCTCTC CGAACTCTTT CGAAATGTGA ACGCAGTGAT GGAGCCTCGT
CTCACGGCCG AGTTTCAGCT TGAGCCTGCG ACCATGGGCA TGATGACCTC CGCCTTCCTT
GGCGCACTGG CCGGCTCGCA GCTGTTCGTC GGCCAGGCCC TGGACAGGTT CGGGCCAAAA
CGCGTGCTGG TGGTTACGCT CTTCCTGGCT GTCGTCGCAT CCGCGCTCTT CGCCGGGGCA
CAAACAGCCC ACATGCTCGT CCTGACGCGT TTCATGATCG GCTTCGGACT TTCCGCTTGC
TGGACCGGCG CCTACAAGGC GAACACCCTG TGGTGGCCGA GGGAGCGCCT GCCCCTGGTA
AACGCCATCA CAATCGCAGC GGCCGGCCTT GGCTCCCTGG CGGCCACCAG CCCGACCGAA
TGGCTGCTAC GCCAAATCGG CTGGCGCGAA ATTTTTCTGG GTCTCGCCGG CGTCACTGCC
ACCATTGCAT TGATCATCGC CACGGTGGTT CCGCCCCAGA CGAGGGAACG GGCCGCACCC
GAGGTCCCGG AACCGGCGGT GAAGGGACTG CGTGGTGTCC TCACGCACCC CGCCTTTCTC
ACCATCGCAC CGGCTTCGGC CCTCTGTCAG GGAGCCTGGG TCGCCTATCA GGGCCTCTGG
GCCGGGGTCT GGCTGCGTGA CGCGATCACC CTCCCGTCGA CTGCGGCAGC GGGCATTCTG
ATGGCACTCT CCCTTGCCGT CATCTTGGGG CAATTCGGCT TCGGCCTGCT CGCCGATCGG
ATCGCCCGCA CCGACCGACA CCTGTTCCAC CTGACGTTCG CCCTGACGCT TGGCTTTGTG
CTGTGTCAGC TCGCGATTGC CGGTGCAGGC GCGTCACTGC AGACCATCCT CTGGGCTGGC
TACGGGCTGT TCACCGCGGG TCCCATCCTT GCCTACGCGC TTCTGGTCCG GCTGCTACCC
GACGCAGTGT CCGGCCGCGC TATCGCCATG CTCAATCTCG GCGCTGTCCT CACCGGTTTC
TTGATGCAGG GCGGCATCGG CGCAGGCATC GAGGCTTTGG TTCGGCTTGG GTGGAGCATT
TCGTCCGCCC ATGTGACGTT CATCGTGCTG ATCGCCGGTC TGCAAGCCAT CGCTCTGGCG
TGGATGGTTC TGCATCAAGG TCGCGTCCTG AATCTGGACA AGGTTCGGTG A
 
Protein sequence
MTDPAQLSPL RRIVFVSLPF TFAYLLSELF RNVNAVMEPR LTAEFQLEPA TMGMMTSAFL 
GALAGSQLFV GQALDRFGPK RVLVVTLFLA VVASALFAGA QTAHMLVLTR FMIGFGLSAC
WTGAYKANTL WWPRERLPLV NAITIAAAGL GSLAATSPTE WLLRQIGWRE IFLGLAGVTA
TIALIIATVV PPQTRERAAP EVPEPAVKGL RGVLTHPAFL TIAPASALCQ GAWVAYQGLW
AGVWLRDAIT LPSTAAAGIL MALSLAVILG QFGFGLLADR IARTDRHLFH LTFALTLGFV
LCQLAIAGAG ASLQTILWAG YGLFTAGPIL AYALLVRLLP DAVSGRAIAM LNLGAVLTGF
LMQGGIGAGI EALVRLGWSI SSAHVTFIVL IAGLQAIALA WMVLHQGRVL NLDKVR