Gene Pden_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1253 
Symbol 
ID4580019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1215990 
End bp1216697 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content73% 
IMG OID639768571 
Producthypothetical protein 
Protein accessionYP_915054 
Protein GI119383998 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AACCCAGCGC CCATCCCGAC GATCCGCATT ACGTCAGCCG CATGGGCTGG 
CTGCGCGCCT CGGTGCTGGG GGCGAATGAC GGCATCGTCT CGGTGGGCGC GCTGATCGTC
GGCGTGGCGG CGGCCGATCC GGGGCGGCAG GCGATCCTGA TCGCGGGAAC GGCCGGGTTG
GTCGCGGGCG CGATGTCCAT GGCCATGGGC GAATATGTCT CGGTCAGCTC GCAATCGGAT
ACCGAGCGCG CCGACATCGC CCGCGAGCAC GAAGCCCTGC GCGAGATGCC CGAGGAGGAG
TTGCACGAAC TGGCCGCGAT CTACGAATCG CGCGGCATGA CGCCCGGCAC CGCCTTGCAG
GCCGCGCGCG AGGTGACCGA GCATGATGCG CTGGCCGCCC ATGTGCGCGA CGAGCTGGGG
CTCAGCGAGG CATCGAACGC CAATCCGCTG CAGGCGGCGC TGGCCTCGGC CGCGACCTTC
AGCGTCGCGG CGGCGGTGCC GCTTTTGGCG GCGATCATGG CGCCGGGGGG GCAGGTCGTC
GCCAGCGTGC TGGTCGCGGT GGTGGTCGCG CTGGCGGTGC TGGGCGCGCT GGGGGCCTGG
GCCGGCGGCG CCCCGCCCGG GCGGGCGGTG CTGCGGGTGA TCCTGGGCGG CGTCTTCGCA
CTGGCGGTCA CCGCCGGCAT CGGCAAGATC TTCGGCGTGG CGGTCTAG
 
Protein sequence
MSKQPSAHPD DPHYVSRMGW LRASVLGAND GIVSVGALIV GVAAADPGRQ AILIAGTAGL 
VAGAMSMAMG EYVSVSSQSD TERADIAREH EALREMPEEE LHELAAIYES RGMTPGTALQ
AAREVTEHDA LAAHVRDELG LSEASNANPL QAALASAATF SVAAAVPLLA AIMAPGGQVV
ASVLVAVVVA LAVLGALGAW AGGAPPGRAV LRVILGGVFA LAVTAGIGKI FGVAV