Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1173 |
Symbol | |
ID | 4579938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1144701 |
End bp | 1145660 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768489 |
Product | LysR family transcriptional regulator |
Protein accession | YP_914974 |
Protein GI | 119383918 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC GACAGTTGCG CTATTTCACC GCCGTCGCGC GGGAACGGAA CTTCACCCGC GCGGCGCAGA GCCTGAACAT CGCCCAGCCG CCCCTCAGCC GCCAGATACA GCTTCTCGAA GAGGAACTGG GCGTCGTCCT GATCCTGCGC AAGAGCCGGC CCATCAAGCT GACGGATGCG GGACGGCTGT TCTATGAACA GGCGCTTCAG GTGCTGGGGC GCGTCGATCA GATGAAGGAT GCGACGCGCC GGGTCGGACT GAACCGGAAC CGGGTGCTGT CCATCGGCTT CGTGGCATCG ACGCTTTACG GCGGGCTGCC GTCGCTGGTC AGGAAGCTGC GCCAAAATGT GCCCGAACTG GACATCCAGC TGCTTGAGAT GCTGTCGATC CAGCAGATCC CCGCGCTGAA GGAAGGGCGG ATCGACATCG GCTTCGGCCG CCTCAGGCAC AGCGACCCGA ATGTCGTCGG CACCGTCCTG CGCGAGGAAC GGCTTGTGGC CGCCCTGCCC CAGGACACGT CCCTGGCGCG GGATCCCGCA CCGCTGCCCC TGGCTGCGCT GGCCGGGCAG AAGCTGATCG TCTATCCCAA GGAACCGCGG CCCAGCTATG CCGACCAGAT CATCAACCTG CTGCAAGAAG AGGGCATACG CACCGCCGAC GTGCTGGAGG TGCGCGAAAT CCAGACGGCG CTGGGGCTGG TCGCGGCGGA TTCGGGCATC TGCATCATCC CCTCGTCGGC CCGGCAGATG CGGTCGGACG TGAGGTATCG GATAATCGAC AGCCCGCGGG CGACCTCTCC GGTCATCCTC AATCACCGCG CGGGCGACAC GTCGCGCTAT CTCGATCTGG TCAAGCAACT GATCCGGGAC ATGTATGCCG AAAACCCGGT CTGGCTGGAG GCCAACAACC TTCGCGCCCC GATTGCCGGG GAGGAAGGCC CGGGACCATC AGGAAGATAG
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Protein sequence | MDLRQLRYFT AVARERNFTR AAQSLNIAQP PLSRQIQLLE EELGVVLILR KSRPIKLTDA GRLFYEQALQ VLGRVDQMKD ATRRVGLNRN RVLSIGFVAS TLYGGLPSLV RKLRQNVPEL DIQLLEMLSI QQIPALKEGR IDIGFGRLRH SDPNVVGTVL REERLVAALP QDTSLARDPA PLPLAALAGQ KLIVYPKEPR PSYADQIINL LQEEGIRTAD VLEVREIQTA LGLVAADSGI CIIPSSARQM RSDVRYRIID SPRATSPVIL NHRAGDTSRY LDLVKQLIRD MYAENPVWLE ANNLRAPIAG EEGPGPSGR
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