| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1171 |
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| Symbol | |
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| ID | 4579936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1141928 |
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| End bp | 1144021 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768487 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_914972 |
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| Protein GI | 119383916 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCA CGACAAAGGC GGGATTGCTC TGCGCCACCA TTCTTGGCTG GGTGGCAACG
CCGGTCGCGG CGCAGGTGGC CGAGCCATCC CAGATCTTCG TGCTGGGCAC GATCACCCTG
ACGGCGGACA GCGACGAAAG CCGGGGCGGC ACGACGACCA GCGTGACCTC CGACGAGGTC
CTGCGCAGCA ACCGCACCTC GCTGGACGAC GCGCTGCGGG TCGCGCCCGG AGTGCAGGTC
GGCAATACCG GCGGCAGCCG GAACGAGCGG CTGATCCATG TCCGGGGCTT CGACCGCTTT
CAGGTTCCGC TGTCGGTCGA CGGCATCCGC GTCTATCTGC CCGCCGACAA CCGACTGGAT
TACGGCCGCT TCCTGACGCC GGACCTGGCC GAAATCCAGC TGCAAAAGGG CTATGTCTCG
GTCCTGAACG GGCCGGGCGG CATGGGCGGC GCGATCAATC TGGTCACGCG CCAGCCGACC
CAGCCTTTCG AGGGCGAGGC GCGCCTGGGC ATCGAGGCCG GGAACCGCGG CGACGTGACG
GCACGCAGCG GCTTTCTGTC GCTGGGCACG CGGCAACAGG ATTACTGGCT GCAGGGCAGC
CATATGCGGC GGGACAGCGA CGGATTCTAC CTGTCCCGCG ACTATGAGCC GCGACCGCAA
CAGGGCGCGG GCCTGCGCGA CAACAGCGAC ACCGACGACA GCCGCCTGAA CCTGAAGGCG
GGCTGGACGC CGAACGCAAG CGACGAATAT GTGCTCAGCT ATACGCGCCA GACCGGCTCG
AAAAAGGCCC CCTACAACAT CGACCAGCCC ATTCGCGGCA TCACCGACGC GCCCGGACCG
GGCCAGGGCT GGCAGCGCGA CTGGACATGG CCGGAATGGG ACCTGGACAG CCTTGCCTTC
TATTCCTATA CCGAACTGGG CGGCGGCTAT CTGAAGACGC GGGCCTATTA CAATCGCTTC
GACAACCTGC TGTCGGCCTG GGACGATGCC AGCCATTCCG CCCAGACCGA GCGGCGCGCC
TTCGACAGCC GCTACAAGGA CCGGGCCTGG GGGCTGAGCC TGGAGGCGGG GGCCGATCTG
GGCGCGGCCA ACACCTTGCG CGGTGCGCTG CACTATCGCC GCGACAAGCA TCGGTCGATC
CAGTTTTCGC AGCCCGGCCT GGGCGGCGGT GCCGACCCGA CCGAGGTGAG CGAAGAGAAA
ACCTGGTCGC TGGCGCTGGA GAACACCTGG CAGGCGCGCG ACGACCTGAG CGTCATCGCC
GGGATCAGCT ACGACCGCGC CGAGGTTCTG AAGGCCGACC GCACCGCCGA TGATGCGGGC
CTGCCGACAG GCTCTTCGGA TGCGGTGAAC TGGCAGCTGG CCGCGATCTG GCAGCCCGAT
TCCCGCGGAG AGTTCCATGC CAGCCTGTCC TCGCGCACCC GTTTCCCGAC GCTCTTCGAC
CGCTACAGCA CGCGGTTCGG CTCGGCCGTG CCCAATCCCG ACCTGAAATC CGAACGCGCG
CTGAATGTCG AGCTTGGCTA TGGCGGCGAT CTGGGCCCTG CGCGGATCGA GACGGCGCTG
TTCTACAGCA AGGTCAGGGA CATGATCCAG TCGGTGCCGA CCGGCGAGTT GAACGACGAG
GGCGAGGCCC TGTCGCAAAG CCGCAATGTC GGCGACGGCA CCTACAAGGG CTTCGAGGTC
GCGGCCAGTT GGGAACTCGA CGACCGCTTC GGGCTGGTGG CGAACTATAC CTATCTGCAC
CGGGACATCT CCGATCCGAT CCGCGCCGAT TACCGCCCCA CCGACACGCC GCGCCACAGC
GCCTATCTGC GGCTCGACTG GCGGGCGATG GACAACCTGA CCATCTCGCC CTCGGTCGAG
TTTTCCAGCT CTCGCCTGTC GGAAAGCGCG ATCCAGCCCG ACGATCCGGC GCAGATCGCC
TATACCCGCA TGGGCGGCTT CGGACTGGCC AATCTGGATG CCGAATGGCA GGCGACCGAG
CAGGCCAGCG TCGTGTTCGG CATCCGCAAC CTGTTCGACC GGAACTATCA GCTGGTCGAA
GGCTATCCCG AGCCGGGCCG CTCGTTCTTC CTGACGACCC GCGTAACCTT CTGA
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| Protein sequence | MRVTTKAGLL CATILGWVAT PVAAQVAEPS QIFVLGTITL TADSDESRGG TTTSVTSDEV
LRSNRTSLDD ALRVAPGVQV GNTGGSRNER LIHVRGFDRF QVPLSVDGIR VYLPADNRLD
YGRFLTPDLA EIQLQKGYVS VLNGPGGMGG AINLVTRQPT QPFEGEARLG IEAGNRGDVT
ARSGFLSLGT RQQDYWLQGS HMRRDSDGFY LSRDYEPRPQ QGAGLRDNSD TDDSRLNLKA
GWTPNASDEY VLSYTRQTGS KKAPYNIDQP IRGITDAPGP GQGWQRDWTW PEWDLDSLAF
YSYTELGGGY LKTRAYYNRF DNLLSAWDDA SHSAQTERRA FDSRYKDRAW GLSLEAGADL
GAANTLRGAL HYRRDKHRSI QFSQPGLGGG ADPTEVSEEK TWSLALENTW QARDDLSVIA
GISYDRAEVL KADRTADDAG LPTGSSDAVN WQLAAIWQPD SRGEFHASLS SRTRFPTLFD
RYSTRFGSAV PNPDLKSERA LNVELGYGGD LGPARIETAL FYSKVRDMIQ SVPTGELNDE
GEALSQSRNV GDGTYKGFEV AASWELDDRF GLVANYTYLH RDISDPIRAD YRPTDTPRHS
AYLRLDWRAM DNLTISPSVE FSSSRLSESA IQPDDPAQIA YTRMGGFGLA NLDAEWQATE
QASVVFGIRN LFDRNYQLVE GYPEPGRSFF LTTRVTF
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