Gene Pden_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1158 
Symbol 
ID4580471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1131562 
End bp1132419 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID639768476 
Producthypothetical protein 
Protein accessionYP_914961 
Protein GI119383905 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC CCCGCCCAAA GGACACCGGC GAAGGCGCAT CGTATCTTGA ACGGACCTGC 
GATGCCGTGA CCCGAATACT CGGGCCCGAG GCCGAGGCGC GGACCGTCGG CCGTGCCACG
CTGGGGCTGT TCTTCGTCGC CGTCACGCTG GACAGCGGCC ATACCGGGCT GTGCGCCACG
CCGCTGAAAG ACATCCCCGA GGCGGTGTGC TGCCCCTCTT CGGCCATGGC GATGCCGTTT
CCCGGCAAGC TGCGCGGCAT GGGTGCGCTG CGGCTGGCGC AAGAGGCGCT GTCGCATGCG
GGGTTGCGCC GTGCGCTCGG CATCGCGGCG CTGAACGCGC TGGCCCATCT GGCGGCCGAG
CGTCGCGGGC CCCGGGGCTA TCGCGTCGTC GAGGATGCCG ACGCCTTCGA CATCGCCCGC
ATCCGGCCCG ACGAGACAGC GGTCGTCGTC GGCGCCTTCG GCCCGTTCCT CAAGGCGCTG
CGCGGCATCG GCGCGCGGCA TTTCGTGCTG GAAAAGGATC CGGCCACCTT GCGCCCCGAC
GAGATGGGGC ATTTCCGCCC CGCCGAAAGC TATCCTCGGA TCGTGCCCCA GGCGGACGTG
TTGCTGATCA CCGGCACCAC GCTCGTCAAC GACAGCTTGC CTGGGCTGAT CGCCTGCGCC
CGCCCCGAGG CGCGGGTGGT GCTGGTCGGC CCGACCGTGC CGATGCTGCC CGACGCCTTT
CTTGACCGCC GGGGCATGAT CCTGGGCACC GTGCGCGTCG CCGATGCCGA GGCGCTGCAT
GAGGTGCTGG CGCAAGGTGG CTCGGGCTAT CACTTCTTCG GAAAATACGC GCCCAAGATC
GTTCTGGCGC AGGATTGA
 
Protein sequence
MSVPRPKDTG EGASYLERTC DAVTRILGPE AEARTVGRAT LGLFFVAVTL DSGHTGLCAT 
PLKDIPEAVC CPSSAMAMPF PGKLRGMGAL RLAQEALSHA GLRRALGIAA LNALAHLAAE
RRGPRGYRVV EDADAFDIAR IRPDETAVVV GAFGPFLKAL RGIGARHFVL EKDPATLRPD
EMGHFRPAES YPRIVPQADV LLITGTTLVN DSLPGLIACA RPEARVVLVG PTVPMLPDAF
LDRRGMILGT VRVADAEALH EVLAQGGSGY HFFGKYAPKI VLAQD