Gene Pden_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0950 
Symbol 
ID4579661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp933691 
End bp935244 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content69% 
IMG OID639768271 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_914757 
Protein GI119383701 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.943856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGT CCCGAAAGAC CGCCCGCTAT GTGATCGTCC CCGACGACAA CGTCTTCAAC 
GACAGCATGG AAACCACCAG TTTCCGGCTG TTCCGCGCCA TGCACCGGCA GCTGTTCCGC
GCATCGGGCG CAAAGCCCGC GGACAGCACG GCGCGAGGCG CCTGCGAGGG CTCGGCGCCG
ACGATAAGGC CGCGCCTGCG GCTTCTGGAT ACCGAGGTCG GCCGCATCCG GCTGCTCGAT
TCGATCGGCG AGAACGAAGC CTCGCTCGTC AGCATGACGC CCGAGCAGGC GCGCGAATTG
CAGCGCGCCT ATCCCGGCCT GCGCGTGCGG CGCGAGTTGC GGCTTTATCC GCTGCGCTAC
GGGCGGCTCA ACATCATCCG CAAGGAGGCC AAGCCCGCCG CCTTCCGCTC GGCCAAGGAG
CTTGAACTGC GCTGCGTGGA TGCGGCCAGC GGCAAGCCGG TCGCCGGGGC GTCGGTGGTG
GTGGTGCTGG ACAGGAGGCG CGGCTTCGGC ATCTCGGATG CGGTGACGGA CAAGGACGGG
CGGTTCCGCA CGCCCCTGCC CGCCGGCCAG ACCCGGATCG ATGCGGTGAT CTGCCAGCCG
CTGGCCGGAT ACTGGCCCGG CGGCGCCGAG GACATTCCCG TCGAGGCAGA GGGCGTGACC
GGCCTGACCC TGTCCCTGGT CCCGATCCGG GACGATTACG CCGACGGGCT GGAGCGGATG
CTGGCACCGG CGAAAAAGCC CGACGGGCGC GGCGTCCGCG TCGCCATCGT CGATACCGGC
GTCGATCCCG CCAAGGGGCT GAACCTGGAA CGCGGGCTGA ACACCACCGG GACCGAGCCC
GCCGACGAAT GGTTCGACAA CGGCATCGGC CACGGCACCC ATGTCGCCGG CATCGTGGCG
CGGGTCGCAC CGGGGGTCGC GCTGCATTCC TATCGCGTCT TTGAAAAGGG CGACGGCGGA
GCCAGCGAAT TCGCCATCGC CCGCGCCATC CGCCAGGCCG TCGAGGACGG CTGCGACATC
GTCAACCTGA GCCTGGGCCA GTCCTCGGAG CCGATCGCGA TCTCGCGCGA GGTGCGGCGG
GCCCGCGCCC TGGGCGTGGT CTGCGTCGCG GCGGCCGGCA ACGACTACAT GTCGCCCGTC
TCATACCCCG CGCGCTCGGG CGTGGTGGCG GCGGTCTCGG CCGGCGGCAT GCTGGACGCC
TGGCCCGAAG GCGCGATCAC CGGGCGCAAC GTCGCAGACG ATCCCGCCCC CATCCAGGAC
CGCTTTTTCG CCAGATTCAG CAATATCGGA CCGGAAGTGG ACTTTATCGG ACCGGGGGTG
GGGATTATAT CTTGGGTCAA CAAGACCTCG AAAGGGGTGA TGGACGGCAC CTCGATGGCC
TGTCCCGCCG TGGCCGGGCT GATGGCGCGG TTGCTGTCCC GCACCCCCGA GATCCTTTCG
GCAGAGCGCA ACCAGCAGCG TTCCGACGAC ATTATGAAGA TGGCGAACAG CCACGCCGTT
CCGATCGGTT TCGGCCCCGA ATACGAAGGC GCCGGCCTGA TCGACCAGAG TTGA
 
Protein sequence
MRMSRKTARY VIVPDDNVFN DSMETTSFRL FRAMHRQLFR ASGAKPADST ARGACEGSAP 
TIRPRLRLLD TEVGRIRLLD SIGENEASLV SMTPEQAREL QRAYPGLRVR RELRLYPLRY
GRLNIIRKEA KPAAFRSAKE LELRCVDAAS GKPVAGASVV VVLDRRRGFG ISDAVTDKDG
RFRTPLPAGQ TRIDAVICQP LAGYWPGGAE DIPVEAEGVT GLTLSLVPIR DDYADGLERM
LAPAKKPDGR GVRVAIVDTG VDPAKGLNLE RGLNTTGTEP ADEWFDNGIG HGTHVAGIVA
RVAPGVALHS YRVFEKGDGG ASEFAIARAI RQAVEDGCDI VNLSLGQSSE PIAISREVRR
ARALGVVCVA AAGNDYMSPV SYPARSGVVA AVSAGGMLDA WPEGAITGRN VADDPAPIQD
RFFARFSNIG PEVDFIGPGV GIISWVNKTS KGVMDGTSMA CPAVAGLMAR LLSRTPEILS
AERNQQRSDD IMKMANSHAV PIGFGPEYEG AGLIDQS