Gene Pden_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0906 
Symbol 
ID4579055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp890858 
End bp891469 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID639768226 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_914713 
Protein GI119383657 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.201578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0510602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAA CCCAGATCAT CAGCGCCTTC GTCACGCTGT TCGTCGTGAT CGACCCGGTG 
GGGCTTGCGC CGCTGTTCAT CGCGCTGACC CGTGGCATGA CGCCGCAGCG GCGGCGGCGA
ATCGGCTGGC GGGCATTGGC CATCGCGGCG GGGCTGATGA CGCTTTTCGG CCTTGCGGGC
GAGGCGATCC TGACCGGCAT CGGCATCTCG CTTTCCGCCT TTCGCATCGC CGGCGGGCTG
CTTCTGTTCC TGACCGCGCT CGACATGCTT TTCGAACGCC GCACCGAGCG GCGCGAGGGC
CAGGCCAGGG ACGATGACGA CGACCCTTCG GTCTTTCCGC TGGCGACGCC GCTGCTGGCC
GGTCCGGGGG CCTTGGCCAC GATGATCCTG CTGGTCGGCC ATGATGCGAG CGCCGCCCAC
ACGCTGATGA TCCATGGGGT CATGCTGGCG GTGCTGGGGA TCGCCGCGGC GCTGTTCGCC
GTCGCCGGGC CGATCGCCCA TGTGCTGGGC CGCACCGGCA CCATGGTCGT CACCCGGCTT
TTCGGCATGC TGCTGGCAGC GCTGTCGATC CAGTTCGTGA TCGACGGGCT CAAGGGCTCG
GGGCTGGTCT GA
 
Protein sequence
MEITQIISAF VTLFVVIDPV GLAPLFIALT RGMTPQRRRR IGWRALAIAA GLMTLFGLAG 
EAILTGIGIS LSAFRIAGGL LLFLTALDML FERRTERREG QARDDDDDPS VFPLATPLLA
GPGALATMIL LVGHDASAAH TLMIHGVMLA VLGIAAALFA VAGPIAHVLG RTGTMVVTRL
FGMLLAALSI QFVIDGLKGS GLV