Gene Pden_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0892 
Symbol 
ID4578570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand+ 
Start bp875389 
End bp875970 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content63% 
IMG OID639768212 
ProductYceI family protein 
Protein accessionYP_914699 
Protein GI119383643 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.228936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.459809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCCTTGCCCC CGTCGCCGCG ATCACCCTGT TCGGCGCCAC CGCCGCCATG 
GCCGAGCCGG TCGTCTACGA CTTCGATCCC TCGCACAGCC AGGTCGTCTT CGAATACAAC 
CACATGGGCT TTTCGACCAG CACGGGCATC ATCAACGGTG TCACCGGCAA GCTGACGCTG 
GATGCCGAAA ACCCCGCCAA TTCCAGCGTC GAGGCGACCA TCCCGCTGTC GGGGCTTCGC 
ACCGTGTCCG AGGAACTGGA CAAGCACCTG TTCGGGCCGG ATTTCTTCAA CACCGATGCC 
AGCGGCGCGG TCGCGACCTT CAAGTCGACC AAGGTTGAGC CCGAGGACGA CAAGGAAGCG 
AAGGTGACGG GCGACCTGAC GCTGAACGGG GTGACCAAGC AGGTCGTGCT GGATGTCGAC 
CTGAACCAGA TCGCCGCCCA CCCGATGACC GGCAAGGAGG CCGCCGGCTT TGATGCCGAG 
GCCGAGATCA AGCGTTCGGA GTTCAACCTG GGCAAGTTCG CCCCGGCCGT CGAGGACGAG 
GTCGAGATCA AGATCACCGT CGAAGCCGTC AAGGCCGACT GA
 
Protein sequence
MKPILAPVAA ITLFGATAAM AEPVVYDFDP SHSQVVFEYN HMGFSTSTGI INGVTGKLTL 
DAENPANSSV EATIPLSGLR TVSEELDKHL FGPDFFNTDA SGAVATFKST KVEPEDDKEA 
KVTGDLTLNG VTKQVVLDVD LNQIAAHPMT GKEAAGFDAE AEIKRSEFNL GKFAPAVEDE 
VEIKITVEAV KAD