Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0887 |
Symbol | tig |
ID | 4578565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 871325 |
End bp | 872704 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768207 |
Product | trigger factor |
Protein accession | YP_914694 |
Protein GI | 119383638 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.109425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.58484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTGG GACCCGCGCG ATGGTTCGTG GATGAAGGAA GACAAATGCA GGTCAAGGAA ACCCAGAACG AAGGGCTGAA GCGGGGCTAT GAATTCACCC TGCCGGCGGC CGACCTGGCG GCGCAGGTGG ATGCGAAGCT GAAAGAGGCC CAGCCCGAGG TCGAGATGAA GGGCTTCCGC AAGGGCAAGG TGCCGATGGC GCTGCTGAAG AAGCAGTTCG GCCAGCGTAT CATGGGCGAT GCTATGCAAG AGGCCATCGA CAAGGCGCTG CGCGACCATC TGGAGAAATC GGGCGACCGT CCCGCCCTTC AGCCCAAGAT CGAGATGGTC AACGGCGAGA CCTGGAAAGA GGGCGACGAC GTCGTCGTCA CCGTCGCCTA TGAGGCGCTG CCGGCTATTC CCGAAGCCGA CCTCTCGGGC GTCGAGCTGG AGCGGCTGGT GGTTGAGGCC AGCGAGGAGC AGGTGACCGA GGCGCTGGAG AACCTGGCCA AGAACGCCCA GAGCTTCGAG GATCGCAAGA AGGGCACCAA GGCCAAGGAC GGCGATCAGA TCGTGATCGA CTTCAAGGGC ATGGTCGATG GCGAAGCCTT CGAGGGCGGC TCGGCCGAGG ACTATCCCCT GGTGCTGGGC TCCAAGAGCT TCATTCCCGG CTTCGAGGAA CAGCTGGTCG GCGCCAAGGC CGGCGACGAA GTCAAGGTCG AGGTGAAATT CCCCGAGGAT TACGGCCACC CGGCTTTGGC CGGCAAGGAC GCGGTCTTCG AGACCACCGT CAAGGCGGTG AAGGCGCCGA AGGCGGCCGA GATCGACGAC GAACTGGCCA AGAAGTTCGG CGCCGAGAGC CTGGACGCGC TGAAGGGCCA GATCCGCGAG CGGCTGGAGG CCGAATACAA GGGCGCCTCG CGCCAGGTGC TCAAGCGCAC GCTGCTGGAT CGGCTGGACG AGATGGTCAA GTTCGACCTG CCCGAATCGC TGGTCGAGGC CGAGGCGCAC CAGATCGCGC ATCAGCTCTG GCACGAGGAG CATCCGGAGG AGCACGGCCA TAACCATGGC GAGATCGAGC CGACGGACGA GCACAAGAAG CTGGCCGAGC GCCGCGTCCG CCTGGGCCTG CTGCTGGCCG AGATCGGCCA GAAGGCCGAG ATCACCGTCT CGGATCAGGA GATGACCCAG GCCGTGCTGC GCCAGGCCCG TCAGTTCCCG GGCCAGGAGC GCGCCTTCTT CGAGTTCATC CAGCAGAACC CGCAGGCGCA GCAGCAGTTG CGCGCGCCGA TCTTCGAGGA CAAGGTCGTG GACCATATCG TCGAGGGCGC CAAGGTTTCG GAAAAGCCCG TGACCAAGGA CGAGCTGGAA AAGGCCATCG AGGCCCTGGA TCAGGTCTGA
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Protein sequence | MPLGPARWFV DEGRQMQVKE TQNEGLKRGY EFTLPAADLA AQVDAKLKEA QPEVEMKGFR KGKVPMALLK KQFGQRIMGD AMQEAIDKAL RDHLEKSGDR PALQPKIEMV NGETWKEGDD VVVTVAYEAL PAIPEADLSG VELERLVVEA SEEQVTEALE NLAKNAQSFE DRKKGTKAKD GDQIVIDFKG MVDGEAFEGG SAEDYPLVLG SKSFIPGFEE QLVGAKAGDE VKVEVKFPED YGHPALAGKD AVFETTVKAV KAPKAAEIDD ELAKKFGAES LDALKGQIRE RLEAEYKGAS RQVLKRTLLD RLDEMVKFDL PESLVEAEAH QIAHQLWHEE HPEEHGHNHG EIEPTDEHKK LAERRVRLGL LLAEIGQKAE ITVSDQEMTQ AVLRQARQFP GQERAFFEFI QQNPQAQQQL RAPIFEDKVV DHIVEGAKVS EKPVTKDELE KAIEALDQV
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