Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0810 |
Symbol | |
ID | 4580556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 784055 |
End bp | 785524 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639768129 |
Product | extracellular solute-binding protein |
Protein accession | YP_914618 |
Protein GI | 119383562 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCGA AATTCATGCA GGCCGCCGCC ATGGCGGCCG TTCTGGCCAC GCCGGCGCTG GCAGCACAGG ATTCGATCAC GCTGGCCATG GTGCTGGAGC CGCCGAACCT GGACCCGACC GGGGGCGCCG CCGCCGCCAT CGACGAGGTG GTCTATGCCA ATGTCTTCGA AGGGCTGACC CGCATCGCGC CCGACGGCAG CGTGCAGCCC GGCCTGGCCG AAAGCTGGGA AAGCGACGAT GGCCGGACCT ACGTCTTCCA CCTGCGCCCC GGCGTGACCT TCCACGACGG CAGCGCCTTC GACGCGCAGG ACGTGATCTT TTCGCTCGAC CGCGCCCGGG CGCCCGACAG CACCAATGCC CAGAAGGCCC TGTTCGAGGG CATCGAGACG GTCGAGGCGA TCGACCCGCA GACCGTCCGC GTCGCGCTCA AGGCCCCCGA CGGCGGCTTC CCCTTCAAGA TGGCCTGGGG CGACGCGGTG ATGGTGGACC AGGCCAGCAT CGGGGACATC GCCACCAAGC CCGTCGGCAC CGGCCCGTTC CGCTTCGGCG AATGGCGGCA GGGCGACCAT ATCCGGCTCG ACGCCTTCGA CGGCTACTGG GGCGAGAAGC CGGCGCTCAG GACCGCCACC TTCCGCTTCA TCTCCGACCC CAGCGCCGCC TTCGCGGCGA TGATGGCGGG CGATATCGAC GCCTTCCCGA TCTACCCCGC GCCCGAGACG CTGCCCCAGC TGCAATCCGA TCCGCGCTTC AAGGTGCTGG TCGGCACCAC CGAGGGCGAG ACGATCCTGG CCATGAACCA CAAGCACCCG GCGCTGGCCG ACATCAAGCT GCGCGAAGCC ATCGCCCATG CCGTCAACCG CCAGGAAATC ATCGACGGCG CCATGTTCGG CTACGGCACC CCCATCGGCA CGCATTTCGC GCCGCACCAC CCCGATTACG TCGACCTGAC CGGGAAATCG CAATACGACC CGGAGCTGTC GAAAAAGCTG CTGGCCGAGG CAGGGACCCA GAACCTGACG CTGCGCCTTG CCCTGCCGCC GACGCCCTAT GCCCGCCGCG GCGGGGAAAT CGTGGCGGCC GAATTGCGCG CCGTGGGCAT CCAGACGCAG ATCACCAACA TGGAATGGGC GCAATGGCTT GAGCAGGTGT TCAAGAATGC CGATTACGAC CTGACCATCA TCAGCCATGT CGAGCCGATG GATATCGGCA TCTATGCCCG CAAGGACTAT TACTTCAACT ACCGGAACCC CGCCTTCGAC GAGACGATGG CGAAGCTCGA CGCCACCACC GATCCGGCCG AACGCTCGGC ACTGCTGAAG CAGGCGCAGG AAATCCTGGC CGACGACCAT GCCAACGCCT TCCTGTTCCA GATGGCGAAG ACCGGCGTTG CCAAGGCCGA GATCGAGGGC CTGTGGGAAA ACACCCCCAT GCCGGCAAAC GACCTGACCC AGGTGCGCTG GAAGGAATAG
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Protein sequence | MFAKFMQAAA MAAVLATPAL AAQDSITLAM VLEPPNLDPT GGAAAAIDEV VYANVFEGLT RIAPDGSVQP GLAESWESDD GRTYVFHLRP GVTFHDGSAF DAQDVIFSLD RARAPDSTNA QKALFEGIET VEAIDPQTVR VALKAPDGGF PFKMAWGDAV MVDQASIGDI ATKPVGTGPF RFGEWRQGDH IRLDAFDGYW GEKPALRTAT FRFISDPSAA FAAMMAGDID AFPIYPAPET LPQLQSDPRF KVLVGTTEGE TILAMNHKHP ALADIKLREA IAHAVNRQEI IDGAMFGYGT PIGTHFAPHH PDYVDLTGKS QYDPELSKKL LAEAGTQNLT LRLALPPTPY ARRGGEIVAA ELRAVGIQTQ ITNMEWAQWL EQVFKNADYD LTIISHVEPM DIGIYARKDY YFNYRNPAFD ETMAKLDATT DPAERSALLK QAQEILADDH ANAFLFQMAK TGVAKAEIEG LWENTPMPAN DLTQVRWKE
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