Gene Pden_0743 details

Gene Information

• Locus tag: Pden_0743
• Symbol: rplK
• ID: 4579611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008686
• Strand: +
• Start bp: 725043
• End bp: 725495
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639768062
• Product: 50S ribosomal protein L11
• Protein accession: YP_914551
• Protein GI: 119383495
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0080] Ribosomal protein L11
• TIGRFAM ID: [TIGR01632] 50S ribosomal protein L11

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.0168765
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAAGA AAGTTGTCGG CAGCCTCAAG CTGCAAATCA AGGCGGGTCA GGCGAACCCG 
TCCCCGCCCG TCGGTCCGGC CCTGGGTCAG CGCGGCATCA ACATCATGGA ATTCTGCAAG 
GCGTTCAACG CCAAGACGCA GGAGATGGAG CAGGGTGCCC CCGTTCCGGT CGTGATCACC 
TATTACGCCG ACAAGTCCTT CACCTTCGAG ACCAAGACGC CCCCGGCCTC GTTCCTGCTG 
AAGAAGGCCG CCGGCCTGAA GCCGCAGGGC AAGCGCAACC GCGCCAAGGG CTCGGAAAAG 
CCCGGTCGTC AGACCGCCGG CACCGTGACC GCCAAGCAGG TCCGCGAGAT CGCCGAAGCC 
AAGATGAAGG ACCTGTCCGC GAACGACGTC GAAGCCGCGA TGCAGATCAT CTTGGGCTCG 
GCGCGTTCGA TCGGCATCGA GGTGAAAGGC TAA 

 

Protein sequence

MAKKVVGSLK LQIKAGQANP SPPVGPALGQ RGINIMEFCK AFNAKTQEME QGAPVPVVIT 
YYADKSFTFE TKTPPASFLL KKAAGLKPQG KRNRAKGSEK PGRQTAGTVT AKQVREIAEA 
KMKDLSANDV EAAMQIILGS ARSIGIEVKG