| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0715 |
|---|
| Symbol | |
|---|
| ID | 4579524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 697092 |
|---|
| End bp | 698756 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639768033 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_914523 |
|---|
| Protein GI | 119383467 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATC CCCGTCACAA CACCCGCGAC ATTTTCCCGC CGACCGGCAC CGAGATCACC
GCGAAAAGCT GGCTGACCGA GGCGCCGATG CGGATGCTGA TGAACAACCT GCATCCCGAC
GTGGCCGAGA ACCCGCATGA GCTGGTGGTC TATGGCGGCA TCGGCCGTGC CGCCCGCACC
TGGAAGGATT TCGACCTGAT CGTCGACGCG CTGCGCAAGC TGGAGACCGA CGAGACCCTG
CTGGTGCAAT CCGGCAAGCC GGTCGGCGTG TTCAAGACCC ACAAGGATGC CCCGCGGGTG
CTGATCGCCA ACTCGAACCT GGTGCCGCAT TGGGCGAACT GGGACCATTT CAACGAACTG
GATAAGAAGG GCCTGGCCAT GTATGGCCAG ATGACCGCCG GCTCGTGGAT CTATATCGGG
TCGCAGGGCA TCGTTCAGGG CACCTACGAG ACCTTCGTCG AGGCCGGGCG CCAGCATTAC
GGCGGTGACT TGAAAGGCAA GTGGATCCTG ACCGGCGGGC TTGGCGGCAT GGGCGGCGCG
CAACCGCTGG CAGCCGTCAT GGCCGGCGCC TGCTGCCTTG CCGTCGAATG CGACGAGACG
CGCGCCGATT TCCGCCTGCG CACCCGCTAT GTCGACGAAA AGACCCACAG CCTCGACGAG
GCGCTGGAGA TGATCGACCG CTGGACCAAG GCCGGCGAGG CGAAATCGGT GGCGCTGATC
GGCAATGCCG CCGACGTGTT CCCGGAACTG GTCAAGCGCG GCGTGCGTCC CGACATCGTG
ACCGACCAGA CCTCGGCCCA CGACCCGGTG CATGGCTATC TGCCGCAGGG CTGGACCGTC
GCCGAATGGC GCGCGCGCCA GGAAACCGAC CCCAAGGCCG TCGAACGCGC CGCCCGCGCA
TCCATGCGCA AGCAGGTCGA GGCGATGGTG GCCTTCAGCG ACCAGGGCAT CCCGACCGTC
GATTACGGCA ACAACATCCG CCAGATGGCG CTGGAAGAGG GTTTCGAGCG CGCCTTCGCC
TTCCCGGGCT TCGTGCCGGC GTATATCCGG CCGCTGTTCT GCAAGGGCAT CGGTCCGTTC
CGCTGGGCGG CGCTGTCGGG CGACCCCGAA GACATCTACA AGACCGACCA GAAGGTGAAA
GAGCTGGTGG ACGACCCGCA TCTGCACAAC TGGCTGGACA TGGCGCGCGA GCGTATCAGC
TTCCAGGGCC TGCCGGCGCG GATCTGCTGG GTCGGCCTTG GCATCCGCCA CAAGCTGGGC
CTCGCCTTCA ACGAGATGGT GCGCAATGGC GAGCTGAAGG CGCCCATCGT CATCGGCCGC
GACCATCTCG ACTCGGGCTC GGTCGCCTCG CCCAACCGCG AGACCGAGGC GATGCAGGAC
GGCTCGGACG CGGTTTCCGA CTGGCCGCTG CTGAATGCGC TGCTCAATAC CGCCTCGGGC
GCGACCTGGG TGTCGCTGCA CCATGGCGGC GGCGTCGGCA TGGGCTTTTC GCAGCATTCC
GGCATGGTGA TCTGCTGCGA CGGGTCCGAA GATGCCGATG CGCGGCTGGC GCGCGTGTTG
TGGAACGACC CCGCCACCGG CGTCATGCGG CACGCGGACG CGGGCTATCA GATCGCACTG
GACTGCGCGC GGGAGCACGG GTTGAATCTG TCCGCCATTC TCTGA
|
|---|
| Protein sequence | MDNPRHNTRD IFPPTGTEIT AKSWLTEAPM RMLMNNLHPD VAENPHELVV YGGIGRAART
WKDFDLIVDA LRKLETDETL LVQSGKPVGV FKTHKDAPRV LIANSNLVPH WANWDHFNEL
DKKGLAMYGQ MTAGSWIYIG SQGIVQGTYE TFVEAGRQHY GGDLKGKWIL TGGLGGMGGA
QPLAAVMAGA CCLAVECDET RADFRLRTRY VDEKTHSLDE ALEMIDRWTK AGEAKSVALI
GNAADVFPEL VKRGVRPDIV TDQTSAHDPV HGYLPQGWTV AEWRARQETD PKAVERAARA
SMRKQVEAMV AFSDQGIPTV DYGNNIRQMA LEEGFERAFA FPGFVPAYIR PLFCKGIGPF
RWAALSGDPE DIYKTDQKVK ELVDDPHLHN WLDMARERIS FQGLPARICW VGLGIRHKLG
LAFNEMVRNG ELKAPIVIGR DHLDSGSVAS PNRETEAMQD GSDAVSDWPL LNALLNTASG
ATWVSLHHGG GVGMGFSQHS GMVICCDGSE DADARLARVL WNDPATGVMR HADAGYQIAL
DCAREHGLNL SAIL
|
|---|
| |