| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0709 |
|---|
| Symbol | |
|---|
| ID | 4580650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 689801 |
|---|
| End bp | 691162 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639768027 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_914517 |
|---|
| Protein GI | 119383461 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.361558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTA TCTGGGCGGA ACGGGCCTTG CTGCCCGATG GATGGGCAGA GAATGTCCGG
GTGACGGTCG ATCAGGGCCG AATCGCCGCG GTGGAAAAGG ACGCGGCACC GCAAGGCCAT
CGCACCGGCC TGCTGCTGCC GGCCCTGGCG AACCTGCATA GCCACGCCTT TCAGCGCGCC
ATGGCCGGGC TTTCCGAGGC GAAGGGCCCC GAGCCGCGCG ATACCTTCTG GACCTGGCGG
CAGATCATGT ATCGCTTCCT TGATCACCTG ACGCCCGAGG ATGTCGAATC CATCGCCGCG
CTGGTGCAGA TGGAGATGCT GGAGGCCGGT TATGCCACCA ATGTCGAGTT CCATTATCTG
CACCACCGCC CCGGCGGCGG GCATTACGAC AACATCGCCG AAATGGCCGA GCGCATCACC
GCCGCCGCCG GCCGCACCGG CATCGGCTTG ACCCTGCTGC CGGTGCATTA CCAGTTCGGC
GGCGTGGACC GCCGGCCGCT CGCCCCCGGC CAGAACCGCT TCGGCACCAC GCCCGAGGAA
TTCGTGCGGC TGGTCGAGGG GGCCGAGGCC GCGCTGCGCA CCCTGCCCGC CGACGCCGGC
ATCGGCATCG CGCCGCACAG CCTGCGCGCG GTCAGCCCCG AGGCACTGCA GGCCTGCGTG
GCGCTGCGCC CCGGCCGGCC GCTGCACATG CACCTGGCCG AGCAGGTGCC CGAGATCGAG
GAAATCAGCG CCGCCTATGG CCGCCGTCCG GTCGAATGGC TTCTGGACAA CCACCAGCCC
GACCGGCGCT GGACGCTGAT CCACCTGACC CACATGACCG AGGACGAGAC GCGCCGGCTT
GCCGCCACCG GCGCCGTGGC GGGCCTCTGC CCGATCACCG AATCGTCCCT GGGCGACGGC
ATCTTCAACG GCACGATCTG GGCCGAGGAA AGCGGCCGCA TCGGCTTCGG CTCGGACAGC
AACATCCGCA TCTCGCTGGT CGAGGAATTG CGGACGCTGG AATACAGCCA GCGCCTGCGC
GACCGCGGCC GGGCGATCCT GGCCACGCCG GGACGCTCGA CCGGCCGGGT GATCTATGAG
GCGGGGCTGG ACGGCGGCGC CACGGCGGCG GGGCGCGAGA CCGGGGCGAT CCGGCCGGGC
CTCTGGGCCG ATCTGGTCTC GGTGGGGCTG GACAATCCGG TCATGGCGGG ACGCCAGGGC
GACCAGATGC TCGACAGCCT GGTCTTTGCC GGCCATGACG GGCTGGTCCG CGACGCCTGG
TCGGCCGGCC GCCATGTCGT GCAGGGCGGC AGGCATATGG ACCGCGACCG CATCATCGCC
GATTATCTGG CGACCATCGC CCGGCTTCAG GACCGCATGT GA
|
|---|
| Protein sequence | MTVIWAERAL LPDGWAENVR VTVDQGRIAA VEKDAAPQGH RTGLLLPALA NLHSHAFQRA
MAGLSEAKGP EPRDTFWTWR QIMYRFLDHL TPEDVESIAA LVQMEMLEAG YATNVEFHYL
HHRPGGGHYD NIAEMAERIT AAAGRTGIGL TLLPVHYQFG GVDRRPLAPG QNRFGTTPEE
FVRLVEGAEA ALRTLPADAG IGIAPHSLRA VSPEALQACV ALRPGRPLHM HLAEQVPEIE
EISAAYGRRP VEWLLDNHQP DRRWTLIHLT HMTEDETRRL AATGAVAGLC PITESSLGDG
IFNGTIWAEE SGRIGFGSDS NIRISLVEEL RTLEYSQRLR DRGRAILATP GRSTGRVIYE
AGLDGGATAA GRETGAIRPG LWADLVSVGL DNPVMAGRQG DQMLDSLVFA GHDGLVRDAW
SAGRHVVQGG RHMDRDRIIA DYLATIARLQ DRM
|
|---|
| |