Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0675 |
Symbol | |
ID | 4578745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 657740 |
End bp | 659137 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639767993 |
Product | amidohydrolase |
Protein accession | YP_914483 |
Protein GI | 119383427 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0433934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0553063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TGCGCCGGAC CTTCGCCGCG ACCGATGACC TGATCGTCGC GCCGGGCCGC CTGCTGCTGG GCCATGGGCC GCAATCCGAC ATGGCCGTGC TGCTGCGTGA CGGCCGCTTT GCCGAGATCG GCGAGCGCGC CGCATTGCGC GCGCGCCATC CGGCGGCGCG GCTGGCCGAG ATGCCCGGCC ACCTGATGAT GCCGGGCTTC ATCGACACCC ACACCCACCT GACGCAATCG CTGGGCAAGT CGCTGGTCTT TGGCGAGCCC TCCGAGATCT TTCGCCGCAT CTGGGTGCCG CTGGAGGGCA GCCTGGACGA GCATATGGTC TATCTGTCCT CGAAGCTGGC GGCGCTGGAA TGCCTGCGCG GCGGCTTCAC GACGGCGGTC GACGCCGGCA CCCGCTCGGC CGGGCATATC GGCAAGCTGG TCCAGGCCTC GCGCGAGGCC GGGCTGCGGC TGGTCGTCGC GCAGATCTGC AACGACCTGG GCGGCGCGGC GCAGGTCCCC GGACGCGCCG AGATCCTGTG CCGGGCCGAG GCGCATCTGG CCGCCTATCA GGGCGATCCG CTGATCCATG CCTCGCTGGC GATCTCGATC CCCGAGGTGG CCAGCGACGC GATGCTGCGC GACATATCGC AGATGGCGGC GGGGGCGGGC GTTACATTCC AGACCCATGT GAACGAGCAT CTGGTCGCGG TCGAACGCTC GCTGGTCGCG AACGGCCGCC GCCCGCTGGA GCATCTGGCC CATGTCGGCG CGCTGGGCCC GCAGACGCTG ATCGCGCATT CCACGCTGGT CACGCCGTCC GAGCTGAACC TGCTACGCGA TACCGGCACT GCCGTTGCCT ACAACCCCGT CGCCTCGGTC TGGAAGGGCA ATGCGGTTGC GCCCGCGTTG CAGATGCAGG CGCTTGGCAT CCGCTTCGGG CTGGGCACCG ACGGCACCCG CGCCGACGGC TTCCGGCTGA TGGATGCGGC CGAGACCATG CAGCGCGTGG GCTACGGCCT CGCTTCGGGC GACAGTTCCT GCGGCGGGGG CTGGCTGTGG CTGGATGCGG CGACGCGGAT GGCGGCCGAT GCCAGCGGGC TTTCCGCCGT GACCGGGCGC ATCGCCGAAG GATTGGCCGC CGATTTCCTG CTGGTCGATC TGGACCGGCC CGAGCTCACT CCCTCGCACG ACCTGTCCTG GGAACTGGTG CGTTATGGCA ACCGCGACCA GATCGACGCG GTGTTCACGA ATGGCCGGTT GCGGATGGTG CAGGGCTGGC CGGTCGACTG GGACGCGCGC GCCCTGATGG CCGAGATTCG GGAACTTGCC GCCCCGGCCA TCGCCGCCGC GCCGATCCAG CGTATCCATC CCACGGCCGA CAGCCTGATC GCAACGAGGC ATGCGTGA
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Protein sequence | MTDLRRTFAA TDDLIVAPGR LLLGHGPQSD MAVLLRDGRF AEIGERAALR ARHPAARLAE MPGHLMMPGF IDTHTHLTQS LGKSLVFGEP SEIFRRIWVP LEGSLDEHMV YLSSKLAALE CLRGGFTTAV DAGTRSAGHI GKLVQASREA GLRLVVAQIC NDLGGAAQVP GRAEILCRAE AHLAAYQGDP LIHASLAISI PEVASDAMLR DISQMAAGAG VTFQTHVNEH LVAVERSLVA NGRRPLEHLA HVGALGPQTL IAHSTLVTPS ELNLLRDTGT AVAYNPVASV WKGNAVAPAL QMQALGIRFG LGTDGTRADG FRLMDAAETM QRVGYGLASG DSSCGGGWLW LDAATRMAAD ASGLSAVTGR IAEGLAADFL LVDLDRPELT PSHDLSWELV RYGNRDQIDA VFTNGRLRMV QGWPVDWDAR ALMAEIRELA APAIAAAPIQ RIHPTADSLI ATRHA
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