| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0625 |
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| Symbol | ubiA |
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| ID | 4579009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 601003 |
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| End bp | 601974 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639767943 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_914433 |
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| Protein GI | 119383377 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.307305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGACCG ACCACCGGAC GCCAGAGGGG CCGACGCCAG AGGGCCCAAG CACCGTCGCC
GACGCGCCGC CGGACAATTG GGTGGACCGC TACGCACCGC CCGATTGGAG GCCGTGGCTA
CGCCTGTCCC GCGCCGACCG GCCGATCGGC ACCTGGCTTT TGCTGCTGCC CTGCTGGTGG
GGCATCGGGC TGGCGATGAT CGCGGGCAGC CCCGGCTGGC GCGATCTGTG GATCGCCGTG
GCCTGCGGCG TGGGCGCAGT GCTGATGCGC GGCGCCGGCT GCACCTGGAA CGACATCACA
GACCGCGACA TCGACGACAA GGTGGCACGC ACCCGCTCGC GGCCGATCCC CTCGGGGCAG
GTGACGGTCC GGGGGGCGAT GGTCTGGCTG GTCGCCCAGT CGCTGGCCGG CTTCGCCATC
CTGCTGACGC TGGGCGGTGC GGCCATCGCG CTGGGCGTGG CCTCGCTTCT GCTGGTGGCG
ATCTATCCTT TCGCCAAGCG TTTCACCTGG TGGCCGCAGC TGTTCCTGGG CCTCGCCTTC
AACTGGGGCG TGCTGCTGGC CTGGGCGGCG CATATGGGCA ACCTGGCCCC GGCGCCGGTG
CTGGCCTACC TTGCAGGCAT CGCCTGGACG ATCTTCTACG ACACGATCTA TGCCCATCAG
GACGCCGAGG ACGACGCGCT GATCGGCGTC AAGTCCACCG CCCGGCTGTT CGGGCGCGAC
ACGCCGCGCT GGCTGGCGGG CTTTGGCACC GCCTCGGTGC TGCTGCTGGG ACTGGCGGTG
ATGGCGGCGG CGCCCGAGGG GCTGGGCCTG ACGCTGGGCC TGCTGGGCGT CGCGGGTTTC
GCTGCGCATC TGGCCTGGCA GTTGCGGCAA TTCGACATGG CGGACGGTGC CGGCTGCCTG
CGGCTTTTCC GCTCGAACCG CGATGCCGGG CTGGTGGTTG CGCTGTTTCT CGCCTTGGCG
GGGCTGGTCT GA
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| Protein sequence | MQTDHRTPEG PTPEGPSTVA DAPPDNWVDR YAPPDWRPWL RLSRADRPIG TWLLLLPCWW
GIGLAMIAGS PGWRDLWIAV ACGVGAVLMR GAGCTWNDIT DRDIDDKVAR TRSRPIPSGQ
VTVRGAMVWL VAQSLAGFAI LLTLGGAAIA LGVASLLLVA IYPFAKRFTW WPQLFLGLAF
NWGVLLAWAA HMGNLAPAPV LAYLAGIAWT IFYDTIYAHQ DAEDDALIGV KSTARLFGRD
TPRWLAGFGT ASVLLLGLAV MAAAPEGLGL TLGLLGVAGF AAHLAWQLRQ FDMADGAGCL
RLFRSNRDAG LVVALFLALA GLV
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