| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0607 |
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| Symbol | |
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| ID | 4579651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 581788 |
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| End bp | 582795 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639767925 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_914415 |
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| Protein GI | 119383359 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.238126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCT TTGCCCTGCG CCGCCTGCTG CTGGCGGTGC CGACGCTGCT GTTCATCTCG
CTGGTGATCT TTCTGCTGCT GGAGGCATCG CCCGGCGATC CGCTGGGCGA CGTGCCGCTG
ACCGTGCCGC CCGAGGTCAA GGAGCGGATG CGCGAGGCGC TTGGCCTGGG CCAAGCGTGG
TATATCCGCT ATGTGTTGTG GCTGAAGCAG TTCTTCTGGG TCGAGCCCCT TTATTGGTTC
GACCGCGCCT TCGGCACCGG CTTCAGCGAG GGGATGCAGC GCATCATCAG CTTCCAGAGC
CGCAGCCCGG TCTTCGACGT GATCGCCGAG CGGCTGCCCC AGACGCTGAC CGTCGTCGGC
ATGTCCTATC TGGTCGGCGT GATGATTGCG CTGCCCATCG GCATCATCTC GGCCTATCGG
CAATATTCCT GGTTCGACCA GATCGGCACG TTCATCTCGA TGGTCGGCTT CTCGCTGCCG
ACCTTCTTTA CCGGGGTGGT GCTGATCATC GTCTTCGGCA TCAAGCTGCA ATGGTTCCCC
TCGATCTACG ACACCACGCA TCGGGTCACG GATTGGGACA GCTTCGTGGT GCAGTTGCGC
CAGATGGCGA TGCCGGTCAC GGTGCTGGCG CTTTACAACG CCGCGCAGAT CAGCCGCTTC
ATGCGCGCAT CCATGCTGGA CAACCTGCGG CAGGATTACG TCCGCACCGC CCGCGCCAAG
GGCCTGTCCG AGCGGGTGGT GGTGCTGAAG CATGTGCTGA GGAACAGCCT GATCCCGGTG
GTGACGGTGA TCGCGCTGGG GCTGCCGGCG GTCTTCGGCG GCGCCATCAT CACCGAGCAA
GTGTTCAAGG TGAACGGGCT GGGGCAGCTG CTGATCCTGG CGATCCATGC CAACGACATG
CCGATGGTGA TGACGCTGAC CTTCATCTTC GCGGTGCTCA TCGTCGGCTT CACCCTGATC
GCCGATCTGC TCTATGGCGT GCTGGACCCG AGGATTCGCT ATGACTGA
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| Protein sequence | MLSFALRRLL LAVPTLLFIS LVIFLLLEAS PGDPLGDVPL TVPPEVKERM REALGLGQAW
YIRYVLWLKQ FFWVEPLYWF DRAFGTGFSE GMQRIISFQS RSPVFDVIAE RLPQTLTVVG
MSYLVGVMIA LPIGIISAYR QYSWFDQIGT FISMVGFSLP TFFTGVVLII VFGIKLQWFP
SIYDTTHRVT DWDSFVVQLR QMAMPVTVLA LYNAAQISRF MRASMLDNLR QDYVRTARAK
GLSERVVVLK HVLRNSLIPV VTVIALGLPA VFGGAIITEQ VFKVNGLGQL LILAIHANDM
PMVMTLTFIF AVLIVGFTLI ADLLYGVLDP RIRYD
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