Gene Pden_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0536 
Symbol 
ID4579774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp506263 
End bp507711 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content65% 
IMG OID639767854 
Productcation transporter 
Protein accessionYP_914344 
Protein GI119383288 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.306165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA TCCGTCCCGT GGCCAATATC GTCGGCAAGG TCGTCGTCAC GCTGGGGGCG 
GCGATGGCGC TGCCCATGCT GGTCGACTGG TGGCACGGCG ATCCGCATTG GCTGATCTTC
CTGGAATGCG GGATCCTGAC CACGCTGGCC GGCGGGCTGG TGGCGCTGTC CACCCGGCAG
GTGGACAAGT CGCTGACCAT CCAGCAGGTC TTTCTGCTGA CTGCGATGCT GTGGCTGGTG
GTGCCGGTGG CGGGTGCGCT GCCGTTCATG CTGGGCGCAC CGCATGTCGG CTTTACCGAT
GCCTATTTCG AGGCCATGTC GGGCGTCACC ACCACCGGCA CCACGGCATT CCCCGATCTG
GACAACCTGC CCAAGGGCAC GAATCTGTGG CGGGCCTTCC TGAACTGGGC GGGCGGCCTG
GGGATCATCG TCGTCGCCAT GATCTTCCTG CCGGCGATGA AGGTCGGGGG CATGCAGTTC
TTTCGCTCGG AAGGCTTCGA TACCCTGGGC AAGATCCTGC CCCGCGCCTT CGACATCGCG
CGCGAGATGA CCGGGGTCTA TATCGCCATG ACTGCAAGCT GCATGGTGGT CTATATCCTG
CTGGGCATGA AGGGCTTCGA CGCGCTGGTG CTGGCGCTGT CCACCTGCTC GACCGGCGGA
TTCTCCAATT ACGACGCCAG TTTCGCGCCC TTCATCGGGC CGGCGGAATA TGCCGCCGCC
TTCTTCATGA TCCTGGCCTC GATCCCCTTC ATCCGCATGG TGCAGCTGAT CCGCGGCTCG
GCCGAGCCGA TCTGGCGCGA CATCCAGGTC CGGGCCTATC TGCGCTGGAC CTTCTACGCC
ATCGCGGTGG TGGTGCTCTA CCGGCTCTTG TGGCTTGAGG CGAAGAACCC CCTCGACGTG
ATCCGCGAGA CCACGTTCAA CGTCGTCTCG ACCTTTTCCG GCACGGGCTT CGCCTCGACC
GACGTGACGC AATGGGGGCA TTTCCCCTTC GTCATCCTGA TCGTGGTCGG GCTGATCGGC
GGCTGCACCG GCTCGACCTC GTGCTCGGTC AAGGTGTTCC GCTATCTGGT GCTGTTCCAG
GCGGTCAAGG CGCAGCTCAG GCGCATGCAG TCGCCGCATC GGGTGTTTCC GCTGCTCTAC
GGCGGCCGCC CGCTGGAGGA GGACGTGGTC GATTCGGTCA TGGCCTTCTT TACCCTGTTC
ATCCTCAGCT TCGGCCTGCT GATCGTCGGG CTGGCGCTGA CCGGGCTGCA TCCGCGCACG
GCGCTGACCG CGGCCTGGAC CGCGATCGCC AATGTCGGCG TGGTCTGGGG GCCGGAACTG
ACGCCCGAGG GTGCGGTGAC GGATTTCCCC ACCGCCTCGA AATGGCTGAT GATCTGGGGG
ATGTATCTGG GCCGGCTGGA GCTGATCTCG GTGCTGGTGC TGTTTCTGCC GCGGTTCTGG
CGCAGCTAG
 
Protein sequence
MIDIRPVANI VGKVVVTLGA AMALPMLVDW WHGDPHWLIF LECGILTTLA GGLVALSTRQ 
VDKSLTIQQV FLLTAMLWLV VPVAGALPFM LGAPHVGFTD AYFEAMSGVT TTGTTAFPDL
DNLPKGTNLW RAFLNWAGGL GIIVVAMIFL PAMKVGGMQF FRSEGFDTLG KILPRAFDIA
REMTGVYIAM TASCMVVYIL LGMKGFDALV LALSTCSTGG FSNYDASFAP FIGPAEYAAA
FFMILASIPF IRMVQLIRGS AEPIWRDIQV RAYLRWTFYA IAVVVLYRLL WLEAKNPLDV
IRETTFNVVS TFSGTGFAST DVTQWGHFPF VILIVVGLIG GCTGSTSCSV KVFRYLVLFQ
AVKAQLRRMQ SPHRVFPLLY GGRPLEEDVV DSVMAFFTLF ILSFGLLIVG LALTGLHPRT
ALTAAWTAIA NVGVVWGPEL TPEGAVTDFP TASKWLMIWG MYLGRLELIS VLVLFLPRFW
RS