| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0534 |
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| Symbol | truA |
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| ID | 4579772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 504029 |
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| End bp | 504814 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639767851 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_914342 |
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| Protein GI | 119383286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.893451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGTT TCGCCTTGTT GATCGAATAT GACGGCAGCC CCTTTGCCGG CTGGCAGGCC
CAGGCCGAGC GGCCCAGCGT GCAAAGCACC ATCGAGGCGG CGCTCGGCCG GCTCGACCCC
GGCTTCGCTG CCGGCGCGCG GATCGCGGCA GCCGGGCGCA CCGACGCCGG CGTGCATGCC
ACCGGCCAGG TCGCCCATGC CGATCTGGCG CGCGACTGGG ATCCGTTCCG GCTGTCCGAG
GCGCTGAACT GGCATCTCAA GCCCGCCCCC GTCGCCATCC TGGCCGCGGC GCGGGTGGCG
GACGATTTCC ACGCCCGCTT CTCGGCGCAT GAGCGGCGCT ATCTGTTCCG GCTGGTCGCC
CGCCGTGCGC CGCTGACCCA TGATCGCGGC CGCGCCTGGC AGGTGCCGCA TCGGCTGGAC
CTAGCGGCCA TGCGCGCAGG CGCGGCGCAT CTGCTGGGCC GGCACGATTT CACCACCTTC
CGCTCGACCA TGTGCCAGGC GAACAGCCCG GTAAAGACGC TGGACGAGTT GACCATCGAC
GAGGCCGAGA TCCCGCAGGG CCGCGAATAC CGCTTTTTCC TGCGGGCGCG GTCCTTCCTG
CACAATCAGG TGCGCTCGAT CGTCGGCACG CTGGAGCGGG TCGGCGCCGG CGCCTGGCCG
CCCGGGCGCG TGGCCGAGGC GCTGGCCGCA TGCGACCGCG CCGCCTGCGG GCCGGTCTGC
CCGCCGCAGG GGCTTTACCT GACCGGCGTG GGCTACGAGA CCCCGCCCTT CTCCGACAGC
CGCTGA
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| Protein sequence | MPRFALLIEY DGSPFAGWQA QAERPSVQST IEAALGRLDP GFAAGARIAA AGRTDAGVHA
TGQVAHADLA RDWDPFRLSE ALNWHLKPAP VAILAAARVA DDFHARFSAH ERRYLFRLVA
RRAPLTHDRG RAWQVPHRLD LAAMRAGAAH LLGRHDFTTF RSTMCQANSP VKTLDELTID
EAEIPQGREY RFFLRARSFL HNQVRSIVGT LERVGAGAWP PGRVAEALAA CDRAACGPVC
PPQGLYLTGV GYETPPFSDS R
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