Gene Pden_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0455 
Symbol 
ID4580027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp424675 
End bp424929 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content60% 
IMG OID639767772 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_914264 
Protein GI119383208 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.846585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG CAGACGACGC CCTTCTGGAA GCCTTTGCAA AAATCCTGCG TAAGCAGCGG 
ACTGCGGCTG GCCTGTCCCA GGAGGAGCTT GCGCATAGGG CCGGGGTCAG CATGCGATAT
GTCTCACTTC TGGAAAGCCG CCGACATCAA CCCAGCTTGG CGACCATTCA TGGCCTGTGC
CAAGGTCTGG GGCTTTCCAT GGTGGAGCTT ATCGGTGCGG TCGAGGCTGA GTTCAGCGAA
AGGGGCCAGC ACTGA
 
Protein sequence
MPDADDALLE AFAKILRKQR TAAGLSQEEL AHRAGVSMRY VSLLESRRHQ PSLATIHGLC 
QGLGLSMVEL IGAVEAEFSE RGQH