Gene Pden_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0422 
Symbol 
ID4579468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp392794 
End bp393528 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID639767739 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_914232 
Protein GI119383176 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.644654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC TCGGCGTCAA CATCGACCAC GTCGCCACCA TCCGCAACGC CCGCGGCACG 
CCCTGGCCCG ACCCGGTGCG CGCCGCGAAG CTGGCCGAGG AAGCCGGCGC CGACGGCATC
ACCGCCCATC TGCGCGAGGA TCGCCGCCAT ATCTCGGACG GGGATATCGA CCGGCTGATG
GAATCGCTGC ACCTGCCCTT GAACCTGGAA ATGGCCGCGA CGGCGGAAAT GCAGGCCATC
GCGCTGCGCC ACCGCCCGCA TGCCGTCTGC ATCGTTCCCG AAAAGCGCGA AGAGCGCACG
ACCGAGGGCG GGCTGGACGT GGCCGGAAAC GAGGCATTCC TCGCCGATTT CATCGCGCCG
CTGCGCGAGG CGGGCTGCCG GGTCTCGCTC TTCATCGGCC ACGAACAGGA CCAGATCGAG
GCCGCCGCCC GCATCGGCGC CGCGGTGGTG GAACTGCATA CCGGCGCCTA TTGCGACTTC
GACACCGAGG GCCGGCTGGC CGAACGCGAC CTGGAACTCG AGGCGCTGCG CAGGGGCGCA
GCCCAGGCGC ATCTCCTGGG GCTCGAGGTC CATGCCGGCC ATGGCCTGAC CTTCGACACG
GTCGGCCCGA TCGCCGCCAT CTCCGAGTTG CGCGAGTTGA ACATCGGGCA TTTCCTCATC
GCCGAATCGG TCTTCCTCGG CCTCGGCCCG GCGATCCGCG AGATGCGGCG GAACATGGAC
GCGGCCCGCG CCTGA
 
Protein sequence
MLRLGVNIDH VATIRNARGT PWPDPVRAAK LAEEAGADGI TAHLREDRRH ISDGDIDRLM 
ESLHLPLNLE MAATAEMQAI ALRHRPHAVC IVPEKREERT TEGGLDVAGN EAFLADFIAP
LREAGCRVSL FIGHEQDQIE AAARIGAAVV ELHTGAYCDF DTEGRLAERD LELEALRRGA
AQAHLLGLEV HAGHGLTFDT VGPIAAISEL RELNIGHFLI AESVFLGLGP AIREMRRNMD
AARA