Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0281 |
Symbol | |
ID | 4580186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 259973 |
End bp | 260818 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639767596 |
Product | extracellular solute-binding protein |
Protein accession | YP_914091 |
Protein GI | 119383035 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.575026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCC GACAGGAGAG AATGATGAAG AAATGCCTGA TTGCCGCGGC CCTTCTGGCC GTGCCGTTGC CCGCCCTGGC CGACAAGCTG GAGGACCTGC AGAAACAGGG CTATGTCCGC ATCGCCATCG GCAACGAGCC GCCCTATACC GCCGTGGCCT CGGACGGCAA GGTCTCGGGC GCGGCGCCGG ACGTGGCCCG CGCGGTGTTC GAAAAGCTGG GCATCAAGGA TCTGGAGGCG TCCATCGCCG AATATGGCGC GATGATCCCC AGCCTTCAGG CCGGCCGCGT CGATGCGATC ACCGCGGGCC TGTTCATGAA GCCGGAGCGC TGCAACGCGG TCGCCTATTC CGAGCCGATC CTCTGCGATG CCGAGGCGCT CCTGGTCCCC AAGGGCAATC CCAAGGGCTT CAACTCCTAT GCCGATATCG CGAACGACGC CTCGGCCCGG CTGGGTGCTC CTGGCGGCGG CACCGAGGAA AAGCTGGCGC TGGATGCCGG CGTGCCGCGC GACCGGCTGG TCGTGGTGCC CGATCCGCAA TCGGGGCTGA AGATGGTGCA GGACGGCCGC ATCGACGCCT ATTCGCTGCC GGTCCTGTCG CTCAACGACC TGCTGGCGAA GTCCGGCGAT GCCAACCTCG AGGTCTTTGC TCCGGTCGAG GGCGCCCCGG TCTATTGCGA CGGCGCCGCC TTCAACAAGA AGGACACGGC ACTGCGCGAC GCCTTCGACG TGGAACTGGC CAAGCTGAAG GAATCGGGCG AATTCGCTGC CATCGTCGAG CCCTACGGCT TCTCGGCGGC TGCGGCCATG TCCACCACTC GCGACGCCCT CTGCGCCGCC CAGTGA
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Protein sequence | MPTRQERMMK KCLIAAALLA VPLPALADKL EDLQKQGYVR IAIGNEPPYT AVASDGKVSG AAPDVARAVF EKLGIKDLEA SIAEYGAMIP SLQAGRVDAI TAGLFMKPER CNAVAYSEPI LCDAEALLVP KGNPKGFNSY ADIANDASAR LGAPGGGTEE KLALDAGVPR DRLVVVPDPQ SGLKMVQDGR IDAYSLPVLS LNDLLAKSGD ANLEVFAPVE GAPVYCDGAA FNKKDTALRD AFDVELAKLK ESGEFAAIVE PYGFSAAAAM STTRDALCAA Q
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