| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0148 |
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| Symbol | |
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| ID | 4580172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 131779 |
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| End bp | 132783 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767466 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_913961 |
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| Protein GI | 119382905 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.51257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCA TCACGTTCCG CAAACCCGGA CCGGCCATTG TCCTGCTGTT CGCCACCATG
CTGGCGGGCT GCGCCACCCA GAAATCGCCG CAGGTCAGCT ATGACGACCA CGTGCCGCCG
CTGCCTTCGC CGCCCGCTGC CGTTGCCGAT CCGGCACCAA AACCGTTGCA TGTGCCGCCG
GACTGGACAC CGGCGCGCGG CGGCAATACG GCGGAGAGCC CTATCGGTCG GGTGGCGAAT
GCCAATCTCG CCGCCCGGGT CGAGCCGCGC CGCGAGGGCT ACTATAATGC CATACAGGTC
TATCCGTGGA GCGAAGGCGC GCTCTATCAG GTCTATGCCG CGCCCGGACA GATCACCGAT
ATCGCGCTGG AGCCCGGCGA GAGTCTCACC GGCGCCGGCC CCATCGCCGC CGGCGACACC
GCCCGCTGGA TCATCGGCGA TACCGAGAGC GGCAGCGGCG TGTTCCACCG CGTGCATGTG
CTGGTCAAGC CGACACGGCC CGACATCAGT ACTAACCTGG TCATCGCCAC CGACCGGCGC
CGCTACATGC TGGAGCTGCG TGCGAGCGAG GAGGCCTGGA TGCCGGCGGT GTCCTGGCAC
TATCCGGAAT CGTCGGCACC GGCCCAACGG CGAACGGTTC CCGCAGCACC GGCTATACCA
GGCAAAGCAT CCCGCAACCA TCGCTACGGC GTGCAGGTGC AAGGCGCGAG CCCACCCTGG
CGGCCGGTCT CGGTCTTCGA TGACGGCCGC CGGGTCTATG TGGTCTTTCC GCGCGGCATC
GCCCAGGGCG AGATGCCGCC GCTCTTCGTC ATCGGCCCGG ACGGTGCGCC CGAGATCGTC
AACAGCCGCG TCTACGGCAA CGTCATGATC GTCGACCGGC TCTTCGGTGT GGCCGAGTTG
CGGCTTGGGT CCGGCAAGCG CCAGCAGGTG GTACGGATTA TCCGTATGGA ACAGACACGG
GCGGTCGCCC AACCAACCCG CGCGCCGACG AAAGGATCGT CCTGA
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| Protein sequence | MIPITFRKPG PAIVLLFATM LAGCATQKSP QVSYDDHVPP LPSPPAAVAD PAPKPLHVPP
DWTPARGGNT AESPIGRVAN ANLAARVEPR REGYYNAIQV YPWSEGALYQ VYAAPGQITD
IALEPGESLT GAGPIAAGDT ARWIIGDTES GSGVFHRVHV LVKPTRPDIS TNLVIATDRR
RYMLELRASE EAWMPAVSWH YPESSAPAQR RTVPAAPAIP GKASRNHRYG VQVQGASPPW
RPVSVFDDGR RVYVVFPRGI AQGEMPPLFV IGPDGAPEIV NSRVYGNVMI VDRLFGVAEL
RLGSGKRQQV VRIIRMEQTR AVAQPTRAPT KGSS
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