| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0080 |
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| Symbol | |
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| ID | 4580957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 72869 |
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| End bp | 75208 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767398 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_913893 |
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| Protein GI | 119382837 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG TCCCGCCGGA CTCCCGGAGA GCCGCGATGG CCGATGAAGC TGAAAGCATG
ACCACCTTCG CCGTTCTGCG GCCGGATGGA CTGATCAGTT ATTGCAGCGC GCCCTTTGCG
CACCTGCTTG GTTCCGAGGA ACGGGTGGTT GTCGGCACGC CTATCGGTGC ATGGCTTCGC
CCCGTCGAGG GGGCGGGGTC CGGATGGTTC GCTGTCGTCC GGCAGTCAGA GGGACATCTT
TTGCGGACAG GTGGAGTCGG GCAATTCCGT TACCGGCTCG ATCCCATGGC CGGAGGCGGT
GCGGTGCTGC ATCTGATGCA GGGGACCGGA AACCTCGACC CGATCTATGC GCGGGCCTTC
CAGCTCAATC CCGGCCTGTC CGCCCTTTCG GTCCTGGACA CCGGAGAGCA TCTGGATGTC
AACGACGCCT GGCTCAGGAA CATGGAATAT CGGCGCGAGG AGGTGATCGG CCGCACCGCA
AGCGAGATGC AGGTGTGGGA GCAGGGCGAT ACGAGCCGGA CGGAAATCGT TCGCAGGCTG
CGCGAGGATG GAAAGATCGA GAACTTCCAG GCCCGGATGC GGACACGGAC CGGTAAGCTG
CGAGACATCC TGGTCAGCGC CGAGCTTGTC GAACATGCGG GCCGGAAGCT GGCCTTCTTT
GCTTCGCACG ACATCACCGA AGTGAAGAAG GCGCAAGAGG AACTCGAAGC GCTGAACCGG
CAACTCGAAC AGCGGATCGC CGAGCGGACC GCGGAGATCG TGCGGAAGAA CCGCGAACTT
GCCGAGGCGG CCGAACGCGC CCAGGCGGCG AACGAGGCCA AGAGCCAATT CCTGTCGGTC
ATGAGCCATG AAATCCGCAC GCCGCTGAAT GCACTGCTCA ACATGGCCGA GTTGCTGATC
GAGGACGGCA ACCCTGCGCC CGCCGCGGCC CATCTGTCCG GCATCGCCAG TTCCGCACGC
GCGCTGGCCG CCATCGTGGA CGATGTGCTG GACTTTTCCC GCATCGAGTC CGGCCACCTG
GAAATCTACC CCGCCGCGAC GGATATCGGC CGGCTTTGCG AAGAAGCCGT GCGCGGCGTC
GCACCACTGG CGCATCGGAA GGGGCTGGAT ATCGTCCTGA CCTTCGGACA GCGGCTGCCC
GCAACCGCGA TGGTGGACCC GCTGCGGCTG CGCCAGATCC TGTTCAACCT TGTTGGCAAT
GCCATCAAAT ATACTCGGAA AGGCTGGATC GAGGTCAGGG CCGATGTCAC GGGCGAAACC
GCGGAACCCC AGTTGCTGGT CGAGGTGATC GATACCGGGA TCGGCATCCG TCCCAACGAT
CTGGAGCGGA TATTCGAACG ATTTTCCCGC ATCGGCGCTG ATGCCAACCA CGAGATCCAC
GGCGCAGGGC TTGGCCTGAA CATTTCGGCC GGGCTGGCCC GGGCCATGGG CGGCACGATC
AGGGTCGAAA GCGAGGTCGA CCGGGGCAGT GCCTTCCGCG TGACCTTGCC GCTGGTAACA
TGCGGCGAGC TTGCCGAGGA CCCCTTGCGC CAACCCTTGC AAGGCCGCGT GGCCCTGCTC
GGCCCGGCCA CCAGGACTCG CTCGACATTC GAAGCGATCC TGAAGAGGCA GGGGGTGGTC
GCGCAACGGG TGTTGTCGGC CTCCGGTGCC CAGGTGATAA CGATGGAGTC GGGCCGCTCG
GCGATCGACT GCGCGATGAG GCAATCCTTC GACATCCTGC TGCTGGACTT GAGGATGCCC
GATCTCAGCG GCTATGAAAC GGCAGTGCGG ATCAGGGCCT TGGGCGGATG GGCGGCCGAC
GTTCCCATCG TAGCGGTGTC GGCCAATATT GCCCCCGATA AGGCGCAGAT GCAGGCGGCG
GGGATCGACG GCTTTCTTGC CAAGCCCTTC ACCCCTACGG CACTGCGCGC GAAAGTGCAG
GGCCACCTGC ATCATTCGGC AGGTGACACC GAGCCGGACG ATTCTATCAG GGCGGATGCG
ACACCCGTGC TCGATGAGAG CTTTCTGGCC GCCCAGGTCA CCTATGCCGG ACCGGATGCG
GTTGGGAAGG CGATTGCGGG TTTCCTCGGT AACTTGGACG GTCGGCTGTC TCGTATCTGG
TCCGGCGCCG ATGCAAGGGA GCGCGCCGAT GCCGCCCATA TGCTTGCCGG TGCGGCCGGC
GCGTTGGGGC TGCTGGATCT GGCAACCCAT TGCAGGCGGC TCGCGAGCGA CAGGGGCGAC
AGCCCGACAG CGTCCTTGCG GCAAGACCGA GACATCCTGG CGTCAAGTGC GGGACGAGCT
GTTGCCGCCT TGAGGGAGGT CAGGGATAAA CTCGCTGCCG GTTCATCCCG ACAGGACTGA
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| Protein sequence | MAGVPPDSRR AAMADEAESM TTFAVLRPDG LISYCSAPFA HLLGSEERVV VGTPIGAWLR
PVEGAGSGWF AVVRQSEGHL LRTGGVGQFR YRLDPMAGGG AVLHLMQGTG NLDPIYARAF
QLNPGLSALS VLDTGEHLDV NDAWLRNMEY RREEVIGRTA SEMQVWEQGD TSRTEIVRRL
REDGKIENFQ ARMRTRTGKL RDILVSAELV EHAGRKLAFF ASHDITEVKK AQEELEALNR
QLEQRIAERT AEIVRKNREL AEAAERAQAA NEAKSQFLSV MSHEIRTPLN ALLNMAELLI
EDGNPAPAAA HLSGIASSAR ALAAIVDDVL DFSRIESGHL EIYPAATDIG RLCEEAVRGV
APLAHRKGLD IVLTFGQRLP ATAMVDPLRL RQILFNLVGN AIKYTRKGWI EVRADVTGET
AEPQLLVEVI DTGIGIRPND LERIFERFSR IGADANHEIH GAGLGLNISA GLARAMGGTI
RVESEVDRGS AFRVTLPLVT CGELAEDPLR QPLQGRVALL GPATRTRSTF EAILKRQGVV
AQRVLSASGA QVITMESGRS AIDCAMRQSF DILLLDLRMP DLSGYETAVR IRALGGWAAD
VPIVAVSANI APDKAQMQAA GIDGFLAKPF TPTALRAKVQ GHLHHSAGDT EPDDSIRADA
TPVLDESFLA AQVTYAGPDA VGKAIAGFLG NLDGRLSRIW SGADARERAD AAHMLAGAAG
ALGLLDLATH CRRLASDRGD SPTASLRQDR DILASSAGRA VAALREVRDK LAAGSSRQD
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