Gene Pden_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0030 
Symbol 
ID4578884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp25309 
End bp26127 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID639767341 
ProductABC-2 type transporter 
Protein accessionYP_913843 
Protein GI119382787 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC GCCTGACCCC GCGCATGTGG CTGACCGCCT TTCTGGGCAT CGCCCGGCGC 
GAGACCCTGC GCTTCGTCAA CCAGCGCGGC CGCTTCCTGG CGGCGCTGGT GCGGCCGCTG
GTCTGGCTTT TCATCTTTGC CGCGGGTTTC CGTGCCGTGC TGGGCCTGTC GATCACGCCG
CCCTATCAGA CCTATGTGCT GTACGAGGTC TATGTGACGC CCGGTCTTTG CGCGATGATC
CAGTTGTTCA ACGGCATGCA AAGCTCGCTC TCGATGGTGC ATGACCGCGA GACCGGGGCG
ATGCGCACGC TGCTGGTCAG CCCGTTTCCG CGCTGGTTCC TGCTGGCCAG CAAGCTGGTG
GCGGGGGTGA TCGTGTCGAT CATCCAGGTC TATACCTTCC TGGCCATCGC TTGGTTCTGG
GACGTGCGCC CGCCCGCCAT CGGCTATCTG GCCGTGCTGC CGGCGCTGTT CCTGTCCGGG
CTGATGCTGG GGGCGATGGG GTTGTTCCTG TCCTCCGCCA TCCGCCAGCT GGAAAACTTT
GCGGGGGTGA TGAATTTCGT CATCTTCCCG ATGTTCTTCG CCTCCAGTGC GCTTTACCCG
CTGTGGCGGA TGAACGAAAG CTCGCCGCTC CTGCATGACA TCTGCGCGGT CAATCCCTTC
ACCCATGCGG TTGAGTTGGT CCGCTTTGCC CTTTACGCGC GCTTCGATCT TCTGTCCTTC
TCGGTGGTGT CGGGTTGCCT GATCCTGTTC TTTGCAGGGG CCGTCGTCAT GTATGATCCG
GCCAAGGGGC TTTGGGCCCG GCGAAAGGGG GGAGCATGA
 
Protein sequence
MSRRLTPRMW LTAFLGIARR ETLRFVNQRG RFLAALVRPL VWLFIFAAGF RAVLGLSITP 
PYQTYVLYEV YVTPGLCAMI QLFNGMQSSL SMVHDRETGA MRTLLVSPFP RWFLLASKLV
AGVIVSIIQV YTFLAIAWFW DVRPPAIGYL AVLPALFLSG LMLGAMGLFL SSAIRQLENF
AGVMNFVIFP MFFASSALYP LWRMNESSPL LHDICAVNPF THAVELVRFA LYARFDLLSF
SVVSGCLILF FAGAVVMYDP AKGLWARRKG GA