Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0030 |
Symbol | |
ID | 4578884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 25309 |
End bp | 26127 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639767341 |
Product | ABC-2 type transporter |
Protein accession | YP_913843 |
Protein GI | 119382787 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGCC GCCTGACCCC GCGCATGTGG CTGACCGCCT TTCTGGGCAT CGCCCGGCGC GAGACCCTGC GCTTCGTCAA CCAGCGCGGC CGCTTCCTGG CGGCGCTGGT GCGGCCGCTG GTCTGGCTTT TCATCTTTGC CGCGGGTTTC CGTGCCGTGC TGGGCCTGTC GATCACGCCG CCCTATCAGA CCTATGTGCT GTACGAGGTC TATGTGACGC CCGGTCTTTG CGCGATGATC CAGTTGTTCA ACGGCATGCA AAGCTCGCTC TCGATGGTGC ATGACCGCGA GACCGGGGCG ATGCGCACGC TGCTGGTCAG CCCGTTTCCG CGCTGGTTCC TGCTGGCCAG CAAGCTGGTG GCGGGGGTGA TCGTGTCGAT CATCCAGGTC TATACCTTCC TGGCCATCGC TTGGTTCTGG GACGTGCGCC CGCCCGCCAT CGGCTATCTG GCCGTGCTGC CGGCGCTGTT CCTGTCCGGG CTGATGCTGG GGGCGATGGG GTTGTTCCTG TCCTCCGCCA TCCGCCAGCT GGAAAACTTT GCGGGGGTGA TGAATTTCGT CATCTTCCCG ATGTTCTTCG CCTCCAGTGC GCTTTACCCG CTGTGGCGGA TGAACGAAAG CTCGCCGCTC CTGCATGACA TCTGCGCGGT CAATCCCTTC ACCCATGCGG TTGAGTTGGT CCGCTTTGCC CTTTACGCGC GCTTCGATCT TCTGTCCTTC TCGGTGGTGT CGGGTTGCCT GATCCTGTTC TTTGCAGGGG CCGTCGTCAT GTATGATCCG GCCAAGGGGC TTTGGGCCCG GCGAAAGGGG GGAGCATGA
|
Protein sequence | MSRRLTPRMW LTAFLGIARR ETLRFVNQRG RFLAALVRPL VWLFIFAAGF RAVLGLSITP PYQTYVLYEV YVTPGLCAMI QLFNGMQSSL SMVHDRETGA MRTLLVSPFP RWFLLASKLV AGVIVSIIQV YTFLAIAWFW DVRPPAIGYL AVLPALFLSG LMLGAMGLFL SSAIRQLENF AGVMNFVIFP MFFASSALYP LWRMNESSPL LHDICAVNPF THAVELVRFA LYARFDLLSF SVVSGCLILF FAGAVVMYDP AKGLWARRKG GA
|
| |