Gene Pcryo_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1304 
Symbol 
ID4034504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1592368 
End bp1594221 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content42% 
IMG OID637973770 
ProductABC transporter related 
Protein accessionYP_580569 
Protein GI93006132 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGT CTCCCCAACC ACGCCGCGTA CAGTTAGACA AGAAACCGCC GGTCGAGAAA 
AAAGAACGGC GGGCGCTGTT GTGGGATATC CTAAAAAAGC TTGCTGTATT TGCAAAACCT
TACCGTTTAC TGATTATTGC CACTTTGATA TTAACAGTGC TTGGCTCCTT TACCGCGCAA
GTTAATGCCT TTGTGTTGCG CTATGCCGTT GATACCTTGA CCGAAATCGC TACCCTTGCC
GATCCATGGG AAGCTGGCGT GCGCATGCTG ACCATTATCA GTGCGGTACT CTTAACCAAA
GAGATATTGT CGATATTCAT CTCTTTTGGA CAGCGCTTCT TTGGTGAAAA AATTCGTATC
AATCTCTCAC GTGATTTGTC GCAAAAAATC ATTGATCGCA TCTTAACCTA TCGTATGGCA
TTTTATACCA GTAGCGAAAA CGACAGCGGT AAATTACAAA CCCGTATTGA TTATGGCGTT
AGTAGTCTTA CAAGCTTGGT GCAAAACTTC TTTATCGATA TGCTACCTCT GTTTGCCAGT
GCCATCGTTT CACTGATTAT TATGTTTTCG ACCAATTTTT GGATAGGCTT GGTTGGTCTG
ATTATCATCC CGATTTACTT TTTTATTAGT CAAAGACAAG CGCGGCGGTT ACAAGGTTTT
CGCCGGCAGA TGCGCGGCTT TAGAGAAGCC AAAAGCGGGA TGGTTATCTC GCTGATTAAT
TCTATCAGTG TCGTAAAATC GTTTGTCCGC GAGTCTATCG AGGCGGAGAA GCATTTACAG
ATTCAAAAAG AGATGACCGA CAATCAGCTG CGTATTCGTA GCATTGGTTT TATTTATGAT
GCAGTAAAGA CCTTTATTGA GCAAATCGGC GTAGTGGTGA TTATTTTACT GACCGCCTAT
TTTGTATTAA AGGGTCAAAT GACCATCGGG ATGATTTTAT TCCATGTCAT GCTATTCCAA
AACGTCGCCG CTCCTATCCG ACAGTTACAT CGTATTTATG ATCAAATCAA CAATGCGCTG
ACCTATGCCG AAGGATTTTT TGAGATTTTA GAAGATGAAA GCCAAGTTGA GAACATCACT
GGCAGAAGCA GTAAAGATTT AAAAGGTCTC ATCGAACTTA AAAACGTTTA TTTTACTTAT
CCCAATGGCA CACAAGCGCT AAAAGATGTC AGCTTTACCA TCAAACCCAA TCGTATTACT
GCACTGGTGG GCCTCTCCGG TGCAGGAAAG AGTACGATTA TTAGCCTATT GGTAAAGTTT
TATGCACCTG ATGCTGGCAG TATCTGTCTC GATGGGTATG ACTTAGCTGA CTGCGATACT
CATGAACTTC GCCAAAATAT CGGGTTGGTA CTACAAAGCA ATCATATTTT CTCAGGTACG
ATTGGCGACA ATATCCGTTA TGGTGATATG AATGCTAGTG ACGATGATAT TGTGATTGCA
GCAAAAAAAG CCTCTATTCA TGAGCAAATC ATGTCGTTAT CCAAAGGCTA TGAGAGTACC
GCAAAATCCC TATCAGGTGG ACAGCAGCAA CGTATTGCGC TAGCAAGGAT GTTCTTAAAG
GATCCGCCTA TTGTGTTTTT GGATGAACCA ACGGCCAGCC TAGACGCTAT TGCCAGTCAA
CAGGTCAAAA AAAGCTTAGA TCTTATTAAG AAAGACCGTA CTGTGATTAT GGTGTCGCAC
AATATTGCCC AAATCATTGA TGCCGATGAC TTAGTAGTGA TAGAAGACGG GCGCGTGGTC
GAGACCGGCA CTCATGAAGA GCTTTACCAT AAAGGCGGCA AGTATTTTGA AATATTCAGT
GCCATGTCAG ATAGCCTGAA CTTAGATAAA ATCAGTCAAA CCTTGAATAG TTAA
 
Protein sequence
MPTSPQPRRV QLDKKPPVEK KERRALLWDI LKKLAVFAKP YRLLIIATLI LTVLGSFTAQ 
VNAFVLRYAV DTLTEIATLA DPWEAGVRML TIISAVLLTK EILSIFISFG QRFFGEKIRI
NLSRDLSQKI IDRILTYRMA FYTSSENDSG KLQTRIDYGV SSLTSLVQNF FIDMLPLFAS
AIVSLIIMFS TNFWIGLVGL IIIPIYFFIS QRQARRLQGF RRQMRGFREA KSGMVISLIN
SISVVKSFVR ESIEAEKHLQ IQKEMTDNQL RIRSIGFIYD AVKTFIEQIG VVVIILLTAY
FVLKGQMTIG MILFHVMLFQ NVAAPIRQLH RIYDQINNAL TYAEGFFEIL EDESQVENIT
GRSSKDLKGL IELKNVYFTY PNGTQALKDV SFTIKPNRIT ALVGLSGAGK STIISLLVKF
YAPDAGSICL DGYDLADCDT HELRQNIGLV LQSNHIFSGT IGDNIRYGDM NASDDDIVIA
AKKASIHEQI MSLSKGYEST AKSLSGGQQQ RIALARMFLK DPPIVFLDEP TASLDAIASQ
QVKKSLDLIK KDRTVIMVSH NIAQIIDADD LVVIEDGRVV ETGTHEELYH KGGKYFEIFS
AMSDSLNLDK ISQTLNS