Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1304 |
Symbol | |
ID | 4034504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1592368 |
End bp | 1594221 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637973770 |
Product | ABC transporter related |
Protein accession | YP_580569 |
Protein GI | 93006132 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGT CTCCCCAACC ACGCCGCGTA CAGTTAGACA AGAAACCGCC GGTCGAGAAA AAAGAACGGC GGGCGCTGTT GTGGGATATC CTAAAAAAGC TTGCTGTATT TGCAAAACCT TACCGTTTAC TGATTATTGC CACTTTGATA TTAACAGTGC TTGGCTCCTT TACCGCGCAA GTTAATGCCT TTGTGTTGCG CTATGCCGTT GATACCTTGA CCGAAATCGC TACCCTTGCC GATCCATGGG AAGCTGGCGT GCGCATGCTG ACCATTATCA GTGCGGTACT CTTAACCAAA GAGATATTGT CGATATTCAT CTCTTTTGGA CAGCGCTTCT TTGGTGAAAA AATTCGTATC AATCTCTCAC GTGATTTGTC GCAAAAAATC ATTGATCGCA TCTTAACCTA TCGTATGGCA TTTTATACCA GTAGCGAAAA CGACAGCGGT AAATTACAAA CCCGTATTGA TTATGGCGTT AGTAGTCTTA CAAGCTTGGT GCAAAACTTC TTTATCGATA TGCTACCTCT GTTTGCCAGT GCCATCGTTT CACTGATTAT TATGTTTTCG ACCAATTTTT GGATAGGCTT GGTTGGTCTG ATTATCATCC CGATTTACTT TTTTATTAGT CAAAGACAAG CGCGGCGGTT ACAAGGTTTT CGCCGGCAGA TGCGCGGCTT TAGAGAAGCC AAAAGCGGGA TGGTTATCTC GCTGATTAAT TCTATCAGTG TCGTAAAATC GTTTGTCCGC GAGTCTATCG AGGCGGAGAA GCATTTACAG ATTCAAAAAG AGATGACCGA CAATCAGCTG CGTATTCGTA GCATTGGTTT TATTTATGAT GCAGTAAAGA CCTTTATTGA GCAAATCGGC GTAGTGGTGA TTATTTTACT GACCGCCTAT TTTGTATTAA AGGGTCAAAT GACCATCGGG ATGATTTTAT TCCATGTCAT GCTATTCCAA AACGTCGCCG CTCCTATCCG ACAGTTACAT CGTATTTATG ATCAAATCAA CAATGCGCTG ACCTATGCCG AAGGATTTTT TGAGATTTTA GAAGATGAAA GCCAAGTTGA GAACATCACT GGCAGAAGCA GTAAAGATTT AAAAGGTCTC ATCGAACTTA AAAACGTTTA TTTTACTTAT CCCAATGGCA CACAAGCGCT AAAAGATGTC AGCTTTACCA TCAAACCCAA TCGTATTACT GCACTGGTGG GCCTCTCCGG TGCAGGAAAG AGTACGATTA TTAGCCTATT GGTAAAGTTT TATGCACCTG ATGCTGGCAG TATCTGTCTC GATGGGTATG ACTTAGCTGA CTGCGATACT CATGAACTTC GCCAAAATAT CGGGTTGGTA CTACAAAGCA ATCATATTTT CTCAGGTACG ATTGGCGACA ATATCCGTTA TGGTGATATG AATGCTAGTG ACGATGATAT TGTGATTGCA GCAAAAAAAG CCTCTATTCA TGAGCAAATC ATGTCGTTAT CCAAAGGCTA TGAGAGTACC GCAAAATCCC TATCAGGTGG ACAGCAGCAA CGTATTGCGC TAGCAAGGAT GTTCTTAAAG GATCCGCCTA TTGTGTTTTT GGATGAACCA ACGGCCAGCC TAGACGCTAT TGCCAGTCAA CAGGTCAAAA AAAGCTTAGA TCTTATTAAG AAAGACCGTA CTGTGATTAT GGTGTCGCAC AATATTGCCC AAATCATTGA TGCCGATGAC TTAGTAGTGA TAGAAGACGG GCGCGTGGTC GAGACCGGCA CTCATGAAGA GCTTTACCAT AAAGGCGGCA AGTATTTTGA AATATTCAGT GCCATGTCAG ATAGCCTGAA CTTAGATAAA ATCAGTCAAA CCTTGAATAG TTAA
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Protein sequence | MPTSPQPRRV QLDKKPPVEK KERRALLWDI LKKLAVFAKP YRLLIIATLI LTVLGSFTAQ VNAFVLRYAV DTLTEIATLA DPWEAGVRML TIISAVLLTK EILSIFISFG QRFFGEKIRI NLSRDLSQKI IDRILTYRMA FYTSSENDSG KLQTRIDYGV SSLTSLVQNF FIDMLPLFAS AIVSLIIMFS TNFWIGLVGL IIIPIYFFIS QRQARRLQGF RRQMRGFREA KSGMVISLIN SISVVKSFVR ESIEAEKHLQ IQKEMTDNQL RIRSIGFIYD AVKTFIEQIG VVVIILLTAY FVLKGQMTIG MILFHVMLFQ NVAAPIRQLH RIYDQINNAL TYAEGFFEIL EDESQVENIT GRSSKDLKGL IELKNVYFTY PNGTQALKDV SFTIKPNRIT ALVGLSGAGK STIISLLVKF YAPDAGSICL DGYDLADCDT HELRQNIGLV LQSNHIFSGT IGDNIRYGDM NASDDDIVIA AKKASIHEQI MSLSKGYEST AKSLSGGQQQ RIALARMFLK DPPIVFLDEP TASLDAIASQ QVKKSLDLIK KDRTVIMVSH NIAQIIDADD LVVIEDGRVV ETGTHEELYH KGGKYFEIFS AMSDSLNLDK ISQTLNS
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