Gene Pcryo_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1224 
Symbol 
ID4035056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1483631 
End bp1485322 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content44% 
IMG OID637973689 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_580489 
Protein GI93006052 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.600367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.164924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG CTGCCCAAAA TCCTACAGCG ATAAACAAAT CGAAGCTGAG CATACCTGTG 
TCGCTATTTT GGCGACTCTT TTTGAGTTTG CTATTTATGA TTCTGATCAC TTCTATCTTA
TCTATAGCAG TAGAGCGCTG GCTTAATGAG CGAGAGCTTG CTAATCGTAT GGATTCTCAA
ATTGATAAGC TGCTTATTCA GCGTGAGCGG CTGGTCATAT CCTTGGAAGC GGGTGACTTA
TCTACTGTAA AGCAGATTTA TAACGAAGAT CGAAGACTCA TGAGCCAAAT CAGGATATAC
GATGAGCAGG GCGCTATTAT ATTTCCAAGA TATCGGTTTC GAGAAAATCG TGTCAAGCGG
CGTCAAGCAC GTGACGTGGC AAGTATAAAG GCAATAGACT TGCAGATAGA AGGTGAGCAA
TCATCTGTAC CACTGAATAT GCACAATTCT GTGAGTAGCA GTACTGACAA TAAAACATCT
GATTATCATG AAATTAGTGA TAAAGAGCGT GTCGATAAGA ACCCTTATAG GGCGTATTCC
TTTGATAAGG ATGGCGTCAA AAGCGCGCAC CCAAATAATA AACCTTTTAG CCTCGATGAT
ATTTTAAAAC CAATGCCGTC TCATAAAGCC ATTGCTGACA TTGATAGCCG ACCTGAGTTA
GCTGAGGTTA CAGTGGTTAT GCCAAATAAT GACAGCGTTA TCATACAGCT GCGTCCGCAC
CTATTATTTA AAGATGTGTT AGAGCTACAG CGGGGCAATT TTATGCTGCG GCTCTTGCTG
ATTATACTCT TTAGCGTGTT GGTGTGCTTT TGGCTCAGTC GTACGTTGAC TCGGCGTATT
GGGCGTGTGC AGGATACCGT ACACCGGATG ATAGATGGCA ACTATGAAGT CAATCCGCAG
TTATCAAGTC TGGGTTCTGA CGAATTGGGG TTATTAGCAA AAGATGTCGC TTTACTATCA
ACGCGGCTCG CTGACAGTGA GCTGGCACGC AAGCAGATGT TAAGTGATAT CTCGCATGAG
CTGCGCTCGC CGCTGGCCCG TCTCGATGTA GCGACTGAGC TGACACGAGA TTTTGCGCCC
AACGCCAGTC GTTATCTTGA CCGTATCGAT AAAGAGTCAA CGCGGATGAA TGAGCTGATT
GAGCAAATTA TCCGTATTCA ATCGTTGCAA ATGCAGCAAT ATACCGTCGA CACTCTAGAA
AATGAGGCAG TAGACATCTG TGAAATTATC AATGAGATTG GTCAAGATGT CTGTTTTGAG
TTTCAGCATA AAAATATATA TTGGCAATGG CATGTGAATC CGTCTTTATT GCCAGATTCT
TGCACAGTAA TGGGCAATCA AGAACAGCTG CATAGTGCCC TTGAAAATAT CATCCGTAAT
GCTTTTATGC ATACTGCTTT TGATTCGGCA GTGATGGCTG AGATACAAGC AGTGAAGATG
AATAATAAAA TGTCAGCTAT TGAAATAAGC ATCACTGACG AGGGGGGCGG TGTTGCAGAA
CAGGATCTGG AGCGTATTTT TCAGCCTTTC GTTAGGCTTG ATACGGCGCG CCATCGCGAA
ACGGGCGGTT ATGGACTGGG GTTGGCAATC GTCCATGCCG TAGTGATGGC ACATAGAGGT
CAGATCACTG TCCATAATCG CCAAGATGGT ATATTGGGGC TTGTGATAAA AGTAATACTA
CCTATTAAAT AG
 
Protein sequence
MTEAAQNPTA INKSKLSIPV SLFWRLFLSL LFMILITSIL SIAVERWLNE RELANRMDSQ 
IDKLLIQRER LVISLEAGDL STVKQIYNED RRLMSQIRIY DEQGAIIFPR YRFRENRVKR
RQARDVASIK AIDLQIEGEQ SSVPLNMHNS VSSSTDNKTS DYHEISDKER VDKNPYRAYS
FDKDGVKSAH PNNKPFSLDD ILKPMPSHKA IADIDSRPEL AEVTVVMPNN DSVIIQLRPH
LLFKDVLELQ RGNFMLRLLL IILFSVLVCF WLSRTLTRRI GRVQDTVHRM IDGNYEVNPQ
LSSLGSDELG LLAKDVALLS TRLADSELAR KQMLSDISHE LRSPLARLDV ATELTRDFAP
NASRYLDRID KESTRMNELI EQIIRIQSLQ MQQYTVDTLE NEAVDICEII NEIGQDVCFE
FQHKNIYWQW HVNPSLLPDS CTVMGNQEQL HSALENIIRN AFMHTAFDSA VMAEIQAVKM
NNKMSAIEIS ITDEGGGVAE QDLERIFQPF VRLDTARHRE TGGYGLGLAI VHAVVMAHRG
QITVHNRQDG ILGLVIKVIL PIK