| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0969 |
|---|
| Symbol | |
|---|
| ID | 4035980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1156189 |
|---|
| End bp | 1156797 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637973433 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_580234 |
|---|
| Protein GI | 93005797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0021423 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTA CCACATTATA TAATCGTCAT GAAGCATTAG AGCGGGCCAT ACAGCTGTTT
TGGCAAAAAG GCTTTCATGC AACCTCTTTA AAGGATATCG AGCAAGCGCT TGACATGCGA
CCAGGCAGTA TTTATGCCGC TTTTGGTAAT AAAGACGGAT TGTTTCAAGA AGCGCTTGAT
TACTATGCGC AGGCAGGGCT AAAGGAGCTT GAGCGTACAT TAGCCAGCTA TGAATCCCCT
TTATTAGGAT TGGCAGCTTA CATGCGTCAG CTTGGCGGTA TCCGCGAAAA AAACCTGCCC
AGTCGGGCAT GTATGTTGGT CAAAAGCTTA CTTGAGCTTG GTGCCCGTGA ACAGTTAGCG
CTAGAGAAAG TTGAAAAATT ACTAGCGGGT ATGGAGGCGC GTTTTGCCGC ATGTTTTGTG
GAAGCGCAGC AGCTAGGAGA GCTGGATGAC ACACTCGATC CACTGAGGTT GGCCCGTCGA
TTACAAGCCG AGGTTATGGG GTTACGTGCT TTTGCTCAGC GCGATGTTGA CAGTGCGGCG
GTTCATGCGC TTGCAGAGGA TATGGCGTAT TCTATAGAAA GCTTGCGCAA TAATGAGTCT
GTTGGTTAA
|
|---|
| Protein sequence | MSRTTLYNRH EALERAIQLF WQKGFHATSL KDIEQALDMR PGSIYAAFGN KDGLFQEALD
YYAQAGLKEL ERTLASYESP LLGLAAYMRQ LGGIREKNLP SRACMLVKSL LELGAREQLA
LEKVEKLLAG MEARFAACFV EAQQLGELDD TLDPLRLARR LQAEVMGLRA FAQRDVDSAA
VHALAEDMAY SIESLRNNES VG
|
|---|
| |