Gene Pcar_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3090 
Symbol 
ID3725797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3603724 
End bp3604776 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content58% 
IMG OID637752701 
Productputative transport protein 
Protein accessionYP_358495 
Protein GI77920680 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACC GCCCCCTGAG CGTTTCTCAG GTTTTCATAA CTCTGGCCGC CCTGGTCATC 
GTTGCAGCGG GTTTAAATGC CGGCAAGGTG ATTCTTGTGC CCTTTCTGCT GGCAGGCTTT
ATCGCCATTT TAAGCGCATC CCCCATGTTC TGGTTGCAGC GCCGCGGGCT GCCATCATGG
CTGGCATTGC TTGTGGTTAT CCTAACGGTA GTGCTGGCCG GGCTGATGCT CGCCGGCCTG
ATAGGCTCCT CGGTCAGCGC TTTTTCGGAA AACCTGCCTC TCTACGAATC GAGGCTACGC
CAATACGCCG ATGTGCTCAC CACCTGGCTG GAACGCAAGA ACATCAGCAT ATCGGGGCAG
GTCCTTACGG AGATTTTCGA TCCCGGCGCC GCCATGAAGC TTGTCGCTTC GCTGTTTAAT
GCCCTGACCA ACGTGCTGGC CAACGGCTTT CTGGTCCTTA TGACGGTTAT TTTCATGCTG
CTTGAAGCTT CGGGCATGCC GGGAAAACTG CGTGCCATTC TCGGCCCGTC GAAGAGTCTC
TCGGGTTTCG ACCACTTTGT ACAAAACGTT CAGCATTATA TGGCCATAAA AACCATCATC
AGCCTCATCA CCGGGGCGCT GATCACCCTG TGGCTGCTGG TGCTGGGCGT CGATTTTCCC
TTGCTATGGG GTGTCCTGGC CTTTTTGCTC AATTACGTCC CGAATATCGG GTCGATCATC
GCCGCCGGCC CCGCCGTGCT GTTGGCCCTG GTTCAGCTGG GCCTGTTGCG GGCACTGCTG
GTGGGTGTCG GCTTTCTGGT GGTCAACCTG GTCATGGGCA GTGCCGTCGA ACCGCGCTTC
ATGGGCAGGG GGCTTGGCCT GTCGCCTTTG GTGGTCTTTT TATCCCTGCT GTTCTGGGGA
TGGCTGCTCG GTCCGGTCGG CATGCTGCTG TCGGTGCCAC TGACCATGAC AGCCAAAATT
GCCCTGGACA GCCACGAGGA TACCCAGTGG GTTGCCACGC TGCTCGGTCC GGCGACAGTA
TCGGCCGTTC CCCGGGAAGC TCAAACCGAC TGA
 
Protein sequence
MSNRPLSVSQ VFITLAALVI VAAGLNAGKV ILVPFLLAGF IAILSASPMF WLQRRGLPSW 
LALLVVILTV VLAGLMLAGL IGSSVSAFSE NLPLYESRLR QYADVLTTWL ERKNISISGQ
VLTEIFDPGA AMKLVASLFN ALTNVLANGF LVLMTVIFML LEASGMPGKL RAILGPSKSL
SGFDHFVQNV QHYMAIKTII SLITGALITL WLLVLGVDFP LLWGVLAFLL NYVPNIGSII
AAGPAVLLAL VQLGLLRALL VGVGFLVVNL VMGSAVEPRF MGRGLGLSPL VVFLSLLFWG
WLLGPVGMLL SVPLTMTAKI ALDSHEDTQW VATLLGPATV SAVPREAQTD