| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3013 |
|---|
| Symbol | |
|---|
| ID | 3725720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3527203 |
|---|
| End bp | 3527958 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637752624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358418 |
|---|
| Protein GI | 77920603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0000000131671 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CGACCTGGTA CCACATGGTT TTTCTGGCTC TGGTCGGGGT TATGGCCGGG
ATCCTCAATG TGCTGGCCGG CGGCGGCTCT CTGCTGACCT TGCCGCTGTT GATTTTCATG
GGGTTGCCGG CAGCCACCGC CAACGGCACC AACCGTATCG CCATCCTGGT GCAGAACCTG
TTCGCCATCT CCGGCTTTCA CCGGCATGGG GTTTTGTCCT GGCGGCTGGC CATGGTATGC
GCCGGTCCGG CCATCGCCGG CAGCTATCTT GGCGCACGTC TGGCCCTGCA GGTCGATGAG
GCGCTTTTTC GGCAGCTGCT TGCCGGCATC ATGCTCGGCG TGCTGGCGCT GACTCTGTGG
GATCCGATGA AAGAGCGACA GGCCCAAGCC GTGCGTCTTT CACCTGGACG ACTGGCGGTC
TTGCTGGCGA GTTTTTTTAT GGTGGGCGTT TATGGCGGGT TCGTGCAGGC AGGCGTCGGA
TTTCTGATTA TCGCGGCCCT GTTGTTTCAG GGCCTTGATC TGGTGCAGAC CAATGCCATC
AAGGTGACCA TCATCTGTTT CTTTACCCTT GTTGCCCTGG CCGTTTTCAT GCGTCACGGC
CAGGTAAACT ACCCCCTCGG TTTATCGCTG GCTGCAGGCA ACGCCTGCGG CGGCTGGCTG
GCCGCACACC TGGCTGTGAA AAAGGGACAC GCCTGGATAA AAAGGATCGT GTCCCTGGCG
ATCATAGTGT TTGCCGTCAA GCTTTTGTTG GGGTGA
|
|---|
| Protein sequence | MIDPTWYHMV FLALVGVMAG ILNVLAGGGS LLTLPLLIFM GLPAATANGT NRIAILVQNL
FAISGFHRHG VLSWRLAMVC AGPAIAGSYL GARLALQVDE ALFRQLLAGI MLGVLALTLW
DPMKERQAQA VRLSPGRLAV LLASFFMVGV YGGFVQAGVG FLIIAALLFQ GLDLVQTNAI
KVTIICFFTL VALAVFMRHG QVNYPLGLSL AAGNACGGWL AAHLAVKKGH AWIKRIVSLA
IIVFAVKLLL G
|
|---|
| |