| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3001 |
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| Symbol | |
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| ID | 3725708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3508628 |
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| End bp | 3511705 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637752612 |
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| Product | cation-multidrug efflux pump |
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| Protein accession | YP_358406 |
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| Protein GI | 77920591 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCA CCCGGGCGGC TCTCGATAAA ACCCGCATCA CCTACGTGGC GTTGGCGGTT
GTGGCGCTGG CGGGGCTGTT TTTCTTCAAA TCCCTGCCCC GCGACGAAGA TCCCGGTTTC
GTGGTGCGCA CCGCCCAGGT GCTGACCTAT TTTCCCGGTG CCAGCCCCGA GCGGGTTGAG
CAACTGGTCA CCGACAAACT GGAAAAGATC ATCCAGGAGA TTCCGGAAAT CGATTACATC
GACAGCGAAT CGAAACCCGG TGTCTCGGTT ATTTTCGTCA ACATCCTCGA GCGCTACAAA
AATATGCGGC CCATCTGGGA CAATTTGCGC CGCAAGGTGG CGCGCGCTAC CGGCGAACTG
CCCGAGGAGG TGGTGGGACC CTTCGTCAAT GACGAGTTCG GGGATATTTT CGGCACTCTC
ATCGCGATTA CCGGCAAGGA TTTCAGCTAT GCCGAGCTTA AAACCATTGC CGATGACTGC
CGCAACGAGT TGTTGCTCAG CGAGGATATC GCCAAGGTCG ACATCCAGGG GGTGCAGCAA
GAGCGTATCT TTGTGGAATA CAACAATGCC CGTCTGGCCG AACTGGGACT GTCGCCCCTG
CAGCTTAAAA GTATCCTCGA GGCACGCAAT ATCATCATCC CCGGCGGCGA GATTTTCACC
GATAAAGAGC AGATCGTGCT GGAACCGACC GGCAATTTCG ATTCGGTCGA AGACCTCAAG
CGCACCGTGA TCAATGTTCC CGGCGGTCAG GATGTGGTGT TCCTGGAGGA CCTTGTGGCG
ATTCACCGCG GCTACATCGA TCCGCCCAAA GCCAAGGTGC ATTACGCCGG CCAACCGGCC
TTGACGCTGG CCATACATCT GCGCGAGGGA GGGGATATCC TCAAGCTCGG CGAGGAAGTT
CAGCAGGCCC TGGTCCGTTT CCAGCAGGCC TACCCCATCG GTGTCAATTT CGACCTGGTG
GCGTTCCAGC CGAAACACGT GGAGCGCAAG GTCAACGAGT TCGTCAACAA CCTGCTGCAG
GCGATGCTCA TCGTGCTGGT GATGATGCTG GTGTTTCTTG GCCTGCGCAC CGGCCTGGTG
GTGGCCGGTC TGATACCGAT GGCGATGATC ATGTCGCTGA TGGTGATGGG CTTTTTAAAT
ATCGGTATCG ACCAGATGTC GCTGGCTTCA CTGATCATCG CTCTGGGCAT GCTGGTCGAT
AATGCCATTG TCATGAGCGA ATCGATCATG GTGCAGATGG CCGAGGGCAA ACCGGCCCGG
CAGGCCGCCA TCGATTCCGC CCAGGAACTG AAAATTCCGC TGCTGACCTC GTCACTGACC
ACCGCCGTCG CGTTTTTGCC GATCTTTCTG GCCAAATCGT CCACCGGCGA ATATACCGCG
CCGCTGTTCA AGGTGGTCAC CATTACCCTG CTCTGCTCCT GGCTGCTGTC GCTGACCATG
ACGCCGCTGC TGTGCACCCA TTTTCTGCAC CCCGAAAGCA AGGCCGGATC GGTTAATTTT
CAATCCCGCT TTTACCGCAG CTACCGCCGG GTGCTGCTGG GCTTGCTGCG CCACCCCTGG
ATGAGCATTG CCGCCATCGT GGTGGTGTTT ATCGCCGCCA TGGCCGCCAT GCAACTGGTG
CCCAAATCGT TTTTCCCGGC CAACGAGAAG GCTATTTTCT ACGCGGAATT ACGCCTGCCC
ATGGGCACCC CGCTCAAACG TACCGAGGCG GTGGTGCAGC AGATTGAGGA TTTCATGCGC
ACCGAACTGG TGCGTAAGGC GGACGGTGAA GGCATCACCG ACTGGGTCGC CTTCATCGGT
GAAGGGGCGC CGCGCTTCAT GCTCCCCTAC AAGCCGGAGC CGCCCAGCCC GGAGTACGCC
TACGTGCTGA TCAACGGCAC CTCGCGGCGG CACAATCTCG AGGTCTCCCT GCCGCGGCTG
GAAGCTTTTT GCCAAAGCCA TTTCCCCGAT CTGACGCCGC GCATCAGGCC CCTCAACCTC
GGTCCGCCCA TCGACAATCC GGTGGAGATT CGCCTGTCCG GTAAAGACAG CGATAAGCTT
TTCGCCATCG CCGACGAGGT AAAGAAGCAT CTCGCCGGCA TGTCCGGCAT CGTCAATATC
GGCGACGACT GGGGCGCCCG CACCAAAAAA CTGGTGGTGC GCGTCAATCA GCCCCGTGCC
TTGCGGGCCG GCCTCACCAG TCGTGACGTA GCGGTGTCGT TGCAGACCAT TCTCAGCGGT
ATCACCACCA CCGAATACCG CGAGCAGGAT GAAGTTATTC CGGTTACGCT GCGCTCCACA
GCTGCCGACC GGCAGGATTT CGGCAAGCTC GAAACCCACA ATATTTATGT TCAGCGCACC
GGCCAGTCGG TGCCTTTGAA GCAGGTAGCC GATATCGAAA TCGCCTGGCA GCCGGCCAAA
ATCCTGCGTC GCGACCGTCG GCGCACGGTT ACTGTCGAGG CGGGTATGGA TCAGACCGGC
AACCCCATTG CCATTGCCCG GAAGATGGAT AGCTGGCTGC AAAAAGCCCA GCAAAAGTGG
CCATTCGGAT ACAAGTACGA AATGGGGGGG GAATTGGAGA CCTCCGGTAA GGCCAACGAG
TCGATCGCTG TCAACCTGCC CCTCACCGGT CTGATCGTGG TGTTGCTGCT GGTGGGACAG
TTCAATTCTC TGCGCCGCCC CCTGATTATC CTGCTGACCA TTCCTCTGGG CATGATCGGC
GTCACCGTCG GTCTACTGCT GACCGGCAGT TATTTCGGCT TCATGACGCT GCTGGGTGTG
ATCTCCCTGG CGGGGATCGT CATAAACAAC GCCATTGTGC TGATTGACCG TATCCAGATC
GAAATCGAGC AAAACGGTCT GCCGCCGGCC GAGGCCATCC TCGAATCGGG CATGCGCCGC
CTGCGCCCGA TTCTGCTGAC CACCGGCACC ACCGTCGGTG GCCTGCTGCC GTTATGGCTT
GGCGGCGGCC CGCTGTGGGA GACGATGGCT ATCGCCATCA TTTTCGGCCT GCTGTTTGCC
ACTGTGCTGA CCCTCGGCGT GGTGCCACTG CTTTACAGCT TGTTTTTCAG GGTGAGTTTC
AAGGATGTTC AGGGATAG
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| Protein sequence | MNITRAALDK TRITYVALAV VALAGLFFFK SLPRDEDPGF VVRTAQVLTY FPGASPERVE
QLVTDKLEKI IQEIPEIDYI DSESKPGVSV IFVNILERYK NMRPIWDNLR RKVARATGEL
PEEVVGPFVN DEFGDIFGTL IAITGKDFSY AELKTIADDC RNELLLSEDI AKVDIQGVQQ
ERIFVEYNNA RLAELGLSPL QLKSILEARN IIIPGGEIFT DKEQIVLEPT GNFDSVEDLK
RTVINVPGGQ DVVFLEDLVA IHRGYIDPPK AKVHYAGQPA LTLAIHLREG GDILKLGEEV
QQALVRFQQA YPIGVNFDLV AFQPKHVERK VNEFVNNLLQ AMLIVLVMML VFLGLRTGLV
VAGLIPMAMI MSLMVMGFLN IGIDQMSLAS LIIALGMLVD NAIVMSESIM VQMAEGKPAR
QAAIDSAQEL KIPLLTSSLT TAVAFLPIFL AKSSTGEYTA PLFKVVTITL LCSWLLSLTM
TPLLCTHFLH PESKAGSVNF QSRFYRSYRR VLLGLLRHPW MSIAAIVVVF IAAMAAMQLV
PKSFFPANEK AIFYAELRLP MGTPLKRTEA VVQQIEDFMR TELVRKADGE GITDWVAFIG
EGAPRFMLPY KPEPPSPEYA YVLINGTSRR HNLEVSLPRL EAFCQSHFPD LTPRIRPLNL
GPPIDNPVEI RLSGKDSDKL FAIADEVKKH LAGMSGIVNI GDDWGARTKK LVVRVNQPRA
LRAGLTSRDV AVSLQTILSG ITTTEYREQD EVIPVTLRST AADRQDFGKL ETHNIYVQRT
GQSVPLKQVA DIEIAWQPAK ILRRDRRRTV TVEAGMDQTG NPIAIARKMD SWLQKAQQKW
PFGYKYEMGG ELETSGKANE SIAVNLPLTG LIVVLLLVGQ FNSLRRPLII LLTIPLGMIG
VTVGLLLTGS YFGFMTLLGV ISLAGIVINN AIVLIDRIQI EIEQNGLPPA EAILESGMRR
LRPILLTTGT TVGGLLPLWL GGGPLWETMA IAIIFGLLFA TVLTLGVVPL LYSLFFRVSF
KDVQG
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