| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2648 |
|---|
| Symbol | |
|---|
| ID | 3725351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3102568 |
|---|
| End bp | 3103779 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637752257 |
|---|
| Product | acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| Protein accession | YP_358054 |
|---|
| Protein GI | 77920239 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR02372] 4-coumarate--CoA ligase, photoactive yellow protein activation family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGG CGCATGACAT GAACCTCGAT AAGCTGGTCT TGCGCCGCGT GCTGCACAGC
ATACTGCGCT CTCTGGTGTG GAATAAAAAC GATTGGGCCG CCGAAAAGCG ACTGGCCGAA
GATACCCGTG CGCCGCTGGC GCAGATTCTC CCGGCAGGTA CGGATCAGGA GCTGGTCGAG
ATTGCGGTCC GTTTTGCCGG GATGTTCGGC TGTGCCGGTC TTGCCGGTGC GTTGACGCCG
CAGATGAGTT GTGAAGAGTG GCTGGAGTGT CTGGTGGCCG GTGGCGCGCT GGGGGTGGCC
GATGTCACTT TCCACAGTTC CGGCTCGACC GGAGAACCGA CCGCCTGCCC GCAACCGCTA
TCGGTGTTGT GGCAGGAGGT GGGCGAGCTG GGAAGGCTGA CGCAAGACCG GCGGCGACTG
GTCAGTGTCG TACCCCAGCA CCATATTTAC GGATTTCTGT TCTCGGTGCT GTTGCCTGCC
CAATTGGGGG TTCCGACCGA GTTGCTGCCG CCTTTTCCCG GTGCCGGATT ATCCGAGTTT
CTGCGCGAGG GGGATTTGCT GATCGCCTTT CCCGCATTCT GGAAAGGCCT TGCATCGTTG
GGCCTGCGGT TTCCGACCGG GGTGCGGGGG GTGACCTCCA CCGGTCCGTG TCCGCCGCAG
ATCATTGAGC AATTGCGGCA GCAGGGGCTT GACGCGATGA TGGAGGTTTA CGGATCGTCG
GAGACCAGCG GCGTCGGCTA TCGTTGGGAT CAGTCCGATG CCTACAGTCT GTTCCGCTTC
TGGCAGCCGG TCGCTCTGCA ACAGACGAGT CCCGATGCCC TCATCCGCCA TCAGCTCAAT
GGACTTATGG CCGAGCCGGT GATGCTCCCC GATGAGGTGC AGTGGCTGGA CGAACGCACG
TTTCGTCCTT TGCGCCGCCG TGATCAGGCG GTGCAGGTGG CCGGCATCAA TGTCTATCCC
CAATACGTCG TGTCCTGCCT CAAACAGCAC CCCGCGGTTG AGGACTGCGT CGTGCGGTTG
ATGCGTCCCG AGGAAGGCGA TCGTCTCAAG GCTTTTGTGG TGCCTGTCGA TCCTCGCCAG
GCAGATGCCA CCTTGCGCAG CGCTTTGATC GACTGGTGCA GGCAGCGGCT CAAAAGCGTG
GAGCAGCCCC GCAGCTTCAC CTTCGGCACC CAACTCCCGA CCCAGGGGAT GGGCAAGCTG
GCCGACTGGT AA
|
|---|
| Protein sequence | MMAAHDMNLD KLVLRRVLHS ILRSLVWNKN DWAAEKRLAE DTRAPLAQIL PAGTDQELVE
IAVRFAGMFG CAGLAGALTP QMSCEEWLEC LVAGGALGVA DVTFHSSGST GEPTACPQPL
SVLWQEVGEL GRLTQDRRRL VSVVPQHHIY GFLFSVLLPA QLGVPTELLP PFPGAGLSEF
LREGDLLIAF PAFWKGLASL GLRFPTGVRG VTSTGPCPPQ IIEQLRQQGL DAMMEVYGSS
ETSGVGYRWD QSDAYSLFRF WQPVALQQTS PDALIRHQLN GLMAEPVMLP DEVQWLDERT
FRPLRRRDQA VQVAGINVYP QYVVSCLKQH PAVEDCVVRL MRPEEGDRLK AFVVPVDPRQ
ADATLRSALI DWCRQRLKSV EQPRSFTFGT QLPTQGMGKL ADW
|
|---|
| |