Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2576 |
Symbol | |
ID | 3725279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3025298 |
End bp | 3025768 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637752187 |
Product | hypothetical protein |
Protein accession | YP_357984 |
Protein GI | 77920169 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000000000709351 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCT GCCTGCTTTG CGTGGGGCGC CTCTCCATCG GTTACCTGCG CGAAGGCGCG GCCGATTTCG AAGCGCGTCT GCAGCGCTAC CTTCCCGTGC GCATTGTGGA GCTGAAGGAA GAAAAGAGCG GCAAAAACGA TGCGGAATAT ATTCGCCGCC AGGAAGGGCG CAGGATTCTT GAAAAAATTC CGGCGGGATC TTTTGTGATC GCGTTGGATG AGCGTGGTCG TTCCGTATCA TCGGAAAAGC TGGCCGCTTT ACTCGAACGG CATATGATGG AGTCGACTCC CGAGTTGACC CTGATTATCG GTGGAGCCTA CGGCCTTTGT GATGAGGTCA AACAGCGCGC TGACATGCTG ATGTCTCTGT CGGAGATGAC TTTGACCCAT CAGATGGCCC GTTTGGTGCT GCTTGAGCAG TTGTATCGCG GTTTTACCAT TGTGAGAAAC GAGCCGTACC ATAACCGTTG A
|
Protein sequence | MKICLLCVGR LSIGYLREGA ADFEARLQRY LPVRIVELKE EKSGKNDAEY IRRQEGRRIL EKIPAGSFVI ALDERGRSVS SEKLAALLER HMMESTPELT LIIGGAYGLC DEVKQRADML MSLSEMTLTH QMARLVLLEQ LYRGFTIVRN EPYHNR
|
| |