Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2500 |
Symbol | pdhR |
ID | 3725202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2939501 |
End bp | 2940232 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637752111 |
Product | GntR transcriptional regulators family |
Protein accession | YP_357909 |
Protein GI | 77920094 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGTT CAGCAAGTCA TGACAAAATG TCAACCCACA TTATCCGTCA GGTGAGAGAA GCGATACTAA AGGGCCAGTT GCAACCCGGG CAATGCCTGC CGCCTGAAAA GGACCTGATT ACACAATTCG GGGTAAGCAA GCACACCCTG CGCGAAGCGC TCCGCAGCCT GGAGGCCATG GGTTTCATTG AAATCAAACG AGGCGCCGGC GGCGGACCGG TGGTCAGCGA GGTCGATATG GAAACGACCC GCGACTCCAT CGCCAATTTC CTTCATTTTC AGAATGTCTC TGTGAAGGAT CTCTCTGAAA TCCGCAAGAT TATCGAACCC TACCTGGCAA GGCTTGCGGC AGAACGTTTC AGCGCCCAGG AAATCGAGAA ACTGGAAGAC ATCGACCGCA AATGCCGGAA GATTTTTGAA AAGAAAAAGA ATGTGGTTGG TGCCAAAGAA GAGGTCGACT TCCATGTTTT TCTGGCCCAG GCCAGCCGCA ATCCGGTAAT GGTCATGATT CTCGATTTTG TCAACAGCAT GCTGACGGAT CTGAAAACCC ATATCAAACC GGGCCAGGAA TTTTCGCAGC ATGTCCTTGA CTCCCATGAA AAAATCTTCA ATGCGATCAA GGCCGGAGAT GCCGATGCGG CAGAAAAAGC CATGTTGGGC CATATCTGCG ATGTCGAAAA TGAGCTGGAG GCTATGCGGG ACAAAGAAGA GAAACAACCC AATCCCAAAT AA
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Protein sequence | MFRSASHDKM STHIIRQVRE AILKGQLQPG QCLPPEKDLI TQFGVSKHTL REALRSLEAM GFIEIKRGAG GGPVVSEVDM ETTRDSIANF LHFQNVSVKD LSEIRKIIEP YLARLAAERF SAQEIEKLED IDRKCRKIFE KKKNVVGAKE EVDFHVFLAQ ASRNPVMVMI LDFVNSMLTD LKTHIKPGQE FSQHVLDSHE KIFNAIKAGD ADAAEKAMLG HICDVENELE AMRDKEEKQP NPK
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