Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2409 |
Symbol | |
ID | 3725111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2835430 |
End bp | 2835774 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637752020 |
Product | cupin family protein |
Protein accession | YP_357818 |
Protein GI | 77920003 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000000116838 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA CCGTTATACG TACCGCGGAA CAGGAAGAAT ATCCGCATCC CCAGCATGAC CGATTTTTCC TGCGCGATGT GGTCACCACC GAAATCAATC CGGCCTTGTC CCTGCACCGC GGTCGCATCG AAGCCGGCGG CGAGATTCGC CCCCATGCCC ACGAAGGGCA GACCGAAACT TTCTACATCC TCGGTGGCGA AGCCCTCTGC ACCATGAACG GCGAGCAGCA CACCTTCGGC GCCGGCTGTT GCGTGGTGGC GCCTCCCGGC GTGCAGCACA GCCTCAAAAA CATCGGCGAC GAACCTGTAG ATCTGCTGGC GATCTTCACA CCACCGCTCA AATAG
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Protein sequence | MKGTVIRTAE QEEYPHPQHD RFFLRDVVTT EINPALSLHR GRIEAGGEIR PHAHEGQTET FYILGGEALC TMNGEQHTFG AGCCVVAPPG VQHSLKNIGD EPVDLLAIFT PPLK
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