| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2406 |
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| Symbol | |
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| ID | 3725108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2831134 |
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| End bp | 2832300 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752017 |
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| Product | twitching motility protein, PilT-like |
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| Protein accession | YP_357815 |
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| Protein GI | 77920000 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.776095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA ACAATATTCT GGCCGTCGCC CTCAAAGCCA AAGCCTCGGA TATCCATATT
AAAGCGGGAT TGCCGCCGAT CTACCGCATC GACGGTGCAT TGCGACCGTT GCCCAAGGCC
CCGCGCCTCG ATGCCGAGGG CGTGCACAAA ATGGCCTACG GCATCATGAA CAAACACCGG
CAGGAATTCT TCGAGGAACA CCACGAGGTC GACATGGCCT ACGGTGTGGC CGGACTCGGT
CGATTTCGCG TCAACGTCTT CACCCAGCGC GGCACGATCA GCATGGTTTT CCGTGTTATT
CCCTTTACCT GCCCGGCACT GGATGATCTG TATCTGCCAC CGGTTATCAA AAAAATCGCC
ATGGAATCGC GTGGTCTGGT GTTGGTGACC GGGGCCACCG GTTCGGGAAA GTCCACCACC
CTGGCGGCCA TGATCGATTA CATCAATACG CACCGTACCG AACACGTCAT CACCGTCGAA
GATCCCATCG AGTTTTTGCA TCGCGACAAA AAGTGCATCG TCAACCAGCG CGAAGTCGGC
AGCGACACCG AAAGCTTCGC CGCGGCACTT AAGCATTCTT TGCGCCAGGA TCCGGACATC
ATCCTGGTCG GCGAGATGCG CGACTTGGAG ACGGTGGAAA CTGCCCTGCA TGCGTCTGAA
ACCGGCCATC TGGTACTGGC CACCCTGCAC ACCATCGATG CACCGGAATC GATCAACCGT
ATCGTCTCGG TATTTCCGCC CCATCAGCAC CGCCAGATCC GATCGCAGCT TTCGGGCGTC
CTCAAAGCGG TGGTTTCGCA GCGCCTGGTG CCGCGTGCCG ACGGAAAGGG CCGCGTACCG
GCGGTGGAAG TCATGATTTC CACCGCTCGT ACCCGTGACC TGATCGACGA CAAGGAAAAA
ACCAAACTGC TTGGCGACGC CATACAGCAA GGCTTCGTAT CGTACGGCAT GCAGACCTTC
GACCAGTCGC TGATGTCGCT GTACCGCAAC GAACTGATCA CTTTCGAAGA AGCGGTCCGA
CAAAGCTCCA ATCCCGACGA CTTCAAACTC AAAGCTTCCG GTATTTCCTC GGCATCCGAC
CTCAGCTGGG AAGACTTTGA CAAGAAGAGT GAAGAATCGG AAGAAGAAGA TTCGGACATC
CTGCGCAACC ATGGCACCTC GAACTGA
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| Protein sequence | MELNNILAVA LKAKASDIHI KAGLPPIYRI DGALRPLPKA PRLDAEGVHK MAYGIMNKHR
QEFFEEHHEV DMAYGVAGLG RFRVNVFTQR GTISMVFRVI PFTCPALDDL YLPPVIKKIA
MESRGLVLVT GATGSGKSTT LAAMIDYINT HRTEHVITVE DPIEFLHRDK KCIVNQREVG
SDTESFAAAL KHSLRQDPDI ILVGEMRDLE TVETALHASE TGHLVLATLH TIDAPESINR
IVSVFPPHQH RQIRSQLSGV LKAVVSQRLV PRADGKGRVP AVEVMISTAR TRDLIDDKEK
TKLLGDAIQQ GFVSYGMQTF DQSLMSLYRN ELITFEEAVR QSSNPDDFKL KASGISSASD
LSWEDFDKKS EESEEEDSDI LRNHGTSN
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