| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2106 |
|---|
| Symbol | |
|---|
| ID | 3724797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2455162 |
|---|
| End bp | 2456217 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637751707 |
|---|
| Product | ABC-type transport system, ATPase component |
|---|
| Protein accession | YP_357516 |
|---|
| Protein GI | 77919701 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACG ATTCGTTGAT CCACACCACC ATCGCTCAGC TGTTGACGCA GCACCCTTAT
GCCAAAGATT TCTTCACCTT GTTAGGGTTA CCCAGTGCCT CCAGACATGA CGCGGTAGAT
ACATTTTTTG CCTCCATATC CCAGGAACGT CTCGACAACC TGGGACTGTC GCGCGAGGAA
CTGGCACCGC GTCTTCAAGC CTTTATCGCC CAGATGGAAA AACTCCGCAC CGACGGTGCT
CCCTCGGTGC AAAACATTAC CTTGTGCGGC GGTCGGGATA AGGACGGACA TCCTGAGAAT
ATCCGGCTGG AACTGCGTCC CGGCGACGTG GTAAGTGTCG TCGGTCCCAC CGGATCCGGC
AAAAGCCGTT TACTGGCCGA TGTCGAATGC CTGGCCCAGG GCGATACCCC CTCGGCACGG
CGGGTGCTTC TGGACGGCCA ATCACCCGAT GACAGCCTTT GGCTTGGCGG TGAGCAACGT
CTGGTCGCAC AGTTGTCCCA GAACATGAAT TTCGTCATGG ACGTCTCCGT TCGCGAATTT
CTTTCCCTGC ACGCCGAAAG CCGCCTGGTG GATGACATCG ACTCCGCTGT CGAACAGATC
TTTTCCACCG CCGTGCTGCT GGCGGGAGAG CCTTTTCAAC TCGACACCCC GGTCACGGCC
CTTTCCGGCG GACAGTCTCG AGCGCTGATG ATCGCCGATG TTGCGTGCCT CAGTGCATCC
CCCATCGTGC TCATCGACGA AATCGAAAAT GCCGGCGTCG ATCGCCGCCA GGCTCTGGAT
CTGCTGGTCA AACAGGAAAA AATCGTGCTG TTGGCCACCC ACGACCCCTT ACTGGCGTTG
CTGGGACAAC GCCGCCTGGT CATCCGCAAT GGCGGGATTG CCGATATTAT CGACACCAGC
GACGCCGAAC GAGCCCTGCT GCACAAACTG AACAGCTTCG ATCGCAAATT TGCCGAACTG
CGCGACCGGG TACGCCACGG ACAGCGCCTC GATTTCGATC TGGAAGATTT TCTATCGGAT
TGCCTGTGCA ACGCCCAGCA GTCCGCTATG GAATAA
|
|---|
| Protein sequence | MTNDSLIHTT IAQLLTQHPY AKDFFTLLGL PSASRHDAVD TFFASISQER LDNLGLSREE
LAPRLQAFIA QMEKLRTDGA PSVQNITLCG GRDKDGHPEN IRLELRPGDV VSVVGPTGSG
KSRLLADVEC LAQGDTPSAR RVLLDGQSPD DSLWLGGEQR LVAQLSQNMN FVMDVSVREF
LSLHAESRLV DDIDSAVEQI FSTAVLLAGE PFQLDTPVTA LSGGQSRALM IADVACLSAS
PIVLIDEIEN AGVDRRQALD LLVKQEKIVL LATHDPLLAL LGQRRLVIRN GGIADIIDTS
DAERALLHKL NSFDRKFAEL RDRVRHGQRL DFDLEDFLSD CLCNAQQSAM E
|
|---|
| |