Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2038 |
Symbol | |
ID | 3724729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2368089 |
End bp | 2370017 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637751640 |
Product | ABC-type transport system, ATPase component |
Protein accession | YP_357449 |
Protein GI | 77919634 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.628193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAAC TGCGAAATAT TATAAAGGAT TTTGGGGACA GGCGTCTATT TGCCGGTATC AACTGGCATA TCCGGCCTGC TGATCGTATT GGCCTTTGCG GAGAGAACGG TACGGGGAAG ACCACCCTGT TGCGAATTCT TGCCGGAGAG GTGCATCTTG ATGGCGGCGA GCTGCAAACC GCCCGCCAGA CAACCATCGG CTACTTGCCT CAGGACGGCT TGGTGCATGA CGGGCGAAGC CTCTTTGAGG AGGTGCGGTC GGCTCTTGCG GACCTTCTCG CCATGGAAGC CGAGTTGCGA TCCCTGGAGG CTCAGATTGG CGAGGACAGC CCGTCGACTC TGTTGGAACG CTATGCAGAG GTGCAGGACG TTTTTCGGCA TCGTGGCGGA TATACCATGG AGGCGGAGAT CGGCAGGGTG CTGGGTGGGC TCGGGTTTGC CGAGAACGAT TGGCAAAAAC CCTGCGAGGA GTTTTCCGGC GGTTGGCAGA TGCGTATCGC TTTGGCCAAA CTGCTGTTGC AGCGTCCCAA TCTGCTGTTG CTCGATGAAC CGACCAATCA TCTCGATCTG CCAGCCCGGG ATTGGCTTGA AAATTATCTG TCCGATTATC CTTTTGCCGT GGTGCTGGTC TCTCACGATC GCTTTTTTCT CGATCGGGTA GTCAATCGTA TCGTTGAACT GTGGAATGGC GCCTTGACCG AGTATCCGGG TAATTACAGC GCCTATCTGA CTGCGCGTGA ACAGCGCATT ACGGCCCTGC GGGCGGCGCG GGTGCGTCAG GATGAAGAAA TTTCCCGCAT CGAGTCTTTT ATCAACCGCT TCCGATATCA GGCCAACAAA GCGGCCCAGG TACAAAGCCG GATCAAGCAG TTGGAAAAGA TCGAACGTAT CGATGTGCCT CCCGAGCGCA AAAGCATTGC TTTTAAATTC CCGGCTCCGC CCAAGGGCGG CCGCCAGGCT ATGGAGTTGG AGGATGTCGA GCACGGATAC GGCACCCTAA GCGTATTGCA GGATGTGTCT TTGCATATAG AGCGCGGAGA AAGGGTGGCA CTGGTCGGCG CCAACGGGGC CGGCAAGTCG ACCCTCATGC GTTTGCTGGC AGGGATTGAA GCGCCGCGAA GCGGTTCGCG GCGCGAAGGG CACAATCTGC ATTTGGCATA TTTTGCCCAG GACCAGGCCA GGGTACTGAA TCCCGAGCAC ACGGTGTTGG AAGAATTGAC CGCTGCGGCG CCCTTTGACA TGGTGCCGCG GGTGCGGGAT ATTCTCGGGG CGTTTTTGTT CTCCGGTGAC GACGTGCTCA AATCGGTAGC GGTATTGTCC GGTGGGGAAC GAAACCGCCT GGCTCTGGCC ATGCTGTTGT TGCGACCGGC CAATCTGCTG TTGCTCGATG AACCGACCAA TCATCTTGAT CTGCAATCCA AGGACGTGCT GCTACGTTCG TTGCTGGCTT ACGAAGGAAC CCTGGTTTTC GTGTCGCATG ATCGCTATTT TGTCGATCGC CTGGCCACGC GGGTTGTCGA AGTTGGCGGC GGTCAGGCTT TGTCGCATCT CGGCAACTAT GAGGATTTTC TGCGAGCCAA GGCTGCCGAT GGTGACCGCA GTCACTCGGC CGAGCGCGTG GAACAGCATC AGGCGGCTTC CGCAACCGGA GCTGCCGGGG CCGAGTCGAC TTCCGGAGCT TCGTATGAAG AACGCAAGGC CGCCAGGCGT GAAGAGCGCC GCAGACAGAA ACAACTGGCG GAGATCGAAA CGTTGATCGA GACCGGCGAG GAAAATCTTG CTCAATTGGA AGCTCGCCTG GCCGATCCCG GTCTGTATGA AGACCCCGAG CGTTCCCGGC AGATCGCTGC GGAATACCAG AGCCTGCAGG ATGAGGTCGG CGTATTGTAC CAACGGTGGG AGTCCCTGCA GCTGGAAGAA TCGGCCTGA
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Protein sequence | MLQLRNIIKD FGDRRLFAGI NWHIRPADRI GLCGENGTGK TTLLRILAGE VHLDGGELQT ARQTTIGYLP QDGLVHDGRS LFEEVRSALA DLLAMEAELR SLEAQIGEDS PSTLLERYAE VQDVFRHRGG YTMEAEIGRV LGGLGFAEND WQKPCEEFSG GWQMRIALAK LLLQRPNLLL LDEPTNHLDL PARDWLENYL SDYPFAVVLV SHDRFFLDRV VNRIVELWNG ALTEYPGNYS AYLTAREQRI TALRAARVRQ DEEISRIESF INRFRYQANK AAQVQSRIKQ LEKIERIDVP PERKSIAFKF PAPPKGGRQA MELEDVEHGY GTLSVLQDVS LHIERGERVA LVGANGAGKS TLMRLLAGIE APRSGSRREG HNLHLAYFAQ DQARVLNPEH TVLEELTAAA PFDMVPRVRD ILGAFLFSGD DVLKSVAVLS GGERNRLALA MLLLRPANLL LLDEPTNHLD LQSKDVLLRS LLAYEGTLVF VSHDRYFVDR LATRVVEVGG GQALSHLGNY EDFLRAKAAD GDRSHSAERV EQHQAASATG AAGAESTSGA SYEERKAARR EERRRQKQLA EIETLIETGE ENLAQLEARL ADPGLYEDPE RSRQIAAEYQ SLQDEVGVLY QRWESLQLEE SA
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