| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1975 |
|---|
| Symbol | |
|---|
| ID | 3724684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2297595 |
|---|
| End bp | 2298374 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637751576 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_357386 |
|---|
| Protein GI | 77919571 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2014] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGC ACATCCAAAA CAAGCTTATG CAAACGTTGC TCGGCAAGGC CGAAACCCTC
AAGATCGAGG AGGTTCGCAT CGGGGTGGGC TATTCGGCGG TGAAACTCGA TAACGGACAT
GCCGGTCTCG CCTGGACGCC CCCCAATAGA GGCGGCGGGT GCACGCATCT TCACGCTGCA
GGGACGCTGG GCGGGAAACC GGCGACGGAA TTGCTGGCCG GTCTCGTCGA AGAACGGCCT
TTACTGCGTG CTCTCGGGGT GGCTACGGCC AATGCGTTGC TTGCCGACAG CCCCAGTCCC
GATGTTTCCA CTGTCAATGC CCTGGAACCG CTGCGCATTA CACCTTCCTG CCATGTGGTC
ATGGTGGGCT ATTTTGGCCC TCTAGTGCGA GATTTACAGA ATGTCGGATG CCGGCTTGAC
ATTGTCGAAC TCGATTCGAA TCGTCCCGGT GTTCTGTCTC CGCAACAGGG GCAAAAGGTT
TTGGGGGTCT GCGATGTTGC TATTTTAACC GGTACCAGCC TGATTACCGG TACTCTGGAC
GAGCTGTTCG CCTCTCTCGG TCGTCCCCGC AGTGCTGTGT TGCTGGGACC GTCGGCACCC
TTGTGTGCCG AGGTCTTTGC CGATACGCCT CTGACCCAGA TCTCCGGCGC CCGTGTTCTT
GATTGTGACA GCGTTTTTCG GGTCATTTCG GAGGGGGGTG GCACCCCCTT GTTGAAGCGG
CATGTCGCTT TTGAAACGCT GCTGTTTAAT GCTGTGCCTG CTTGTGGCGC ATGCCGGTAA
|
|---|
| Protein sequence | MTLHIQNKLM QTLLGKAETL KIEEVRIGVG YSAVKLDNGH AGLAWTPPNR GGGCTHLHAA
GTLGGKPATE LLAGLVEERP LLRALGVATA NALLADSPSP DVSTVNALEP LRITPSCHVV
MVGYFGPLVR DLQNVGCRLD IVELDSNRPG VLSPQQGQKV LGVCDVAILT GTSLITGTLD
ELFASLGRPR SAVLLGPSAP LCAEVFADTP LTQISGARVL DCDSVFRVIS EGGGTPLLKR
HVAFETLLFN AVPACGACR
|
|---|
| |