Gene Pcar_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1904 
SymbolleuB 
ID3724594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2218557 
End bp2219654 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content57% 
IMG OID637751505 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_357315 
Protein GI77919500 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000000997715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AATTCAAGTT GGCGGTATTG CCCGGAGATG GAATCGGTCC TGAAATCATG 
GCGGAAGCCA TGAAGGTACT CGATGCCGTG GAACAGAAGT TTCAAGTGCG TTTTGAGCGT 
CAGTTCGCCA ATGTCGGCGG CGCCGCTATC GACCGGGATG GCAAGGCCTT GCCCGATGCG 
ACTGTGGAGA TCTGCCAGGC TTCCGACGCT ATTCTATTCG GCAGCGTCGG TGGTCCCAAG 
TGGGATACGT TGCCTGCCGA AGAGCGCCCC GAGCGGGGGG CATTGTTGCC GTTGCGGCGT 
ATTTTCGGGC TGTTCTGCAA CTTGCGGCCC GCCATCGTTT TTCCTGCCCT GACCTCCGCT 
TCCTCTTTGA AAGAGGAAGT CATTGCGGGT GGCTTCGATA TTCTGGTCGT GCGGGAGCTT 
ACGGGCGGTA TTTATTTTGC CCAGCCCAAA GGCGTGGAAG GCGAAGGCGG TGAGCGCCGC 
GGTTTCGATA CCATGGCTTA CACCGATGCC GAAGTCGAGC GTATTACGCG CGTGGCTTTC 
GATGCGGCCC GCAAACGCGG CAAGAAACTC GTTTCCATCG ATAAAGCCAA CGTACTGTCG 
ACCTCGGTGC TGTGGCGTGA AGTGGTCGAG CGTGTTTCCG CCGATTATCC GGACGTTGTC 
TTGAGCCACA TGTATGTCGA TAATGCCGCC ATGCAGTTGG TCAAGGCACC CAAGCAGTTC 
GATGTTCTTT TGTGCCCCAA CATGTTCGGC GATATCTTGT CCGATGAAGC GGCTATGCTC 
ACCGGCTCCC TCGGTATGCT TCCCTCCGCC TCCCTGGCCG AGGGTAGTTT CGGCATGTAT 
GAGCCGGCTG GTGGCAGCGC CCCCGATATT GCCGGCAAAA ATATAGCAAA CCCCGTGGCT 
CAGATTCTTT CTGCGGCCAT GTTGCTGCGC TATTCCTGCG GACTTGCCGA TGCCGCCGAT 
GCTGTCGAAA AAGCCGTGGA AAATTGCCTC GCCGCCGGTT TGCGTACCGG AGATATCTAT 
CAGGATGCCG ACGGTGAACA ACTGGTATCC ACCAGCGCCA TGGGCGATGC CGTGGTTGCC 
GAGCTTATTA AAAGTTAA
 
Protein sequence
MKKEFKLAVL PGDGIGPEIM AEAMKVLDAV EQKFQVRFER QFANVGGAAI DRDGKALPDA 
TVEICQASDA ILFGSVGGPK WDTLPAEERP ERGALLPLRR IFGLFCNLRP AIVFPALTSA 
SSLKEEVIAG GFDILVVREL TGGIYFAQPK GVEGEGGERR GFDTMAYTDA EVERITRVAF 
DAARKRGKKL VSIDKANVLS TSVLWREVVE RVSADYPDVV LSHMYVDNAA MQLVKAPKQF 
DVLLCPNMFG DILSDEAAML TGSLGMLPSA SLAEGSFGMY EPAGGSAPDI AGKNIANPVA 
QILSAAMLLR YSCGLADAAD AVEKAVENCL AAGLRTGDIY QDADGEQLVS TSAMGDAVVA 
ELIKS