Gene Pcar_1868 details

Gene Information

• Locus tag: Pcar_1868
• ID: 3724558
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2182027
• End bp: 2182626
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751469
• Product: putative type IV pilin
• Protein accession: YP_357279
• Protein GI: 77919464

Plasmid Coverage information

• Num covering plasmid clones: 64
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCATA GTAAACTGAA ATTGGGCGAG TTATTGCTGG ACGCCGGCCT GGTAAGTGAA 
CGGGAGTTGA AAGCGGCGTT GTGCTATCAA AAGAACCAAC GCTGTCTGCT TGGAGCGTCT 
CTGGTCAAGC TCGGTTTTCT GTCCGATGAT AATCTGCTCG ATTTTCTCGA GCACAGTTTG 
CAGTTGGAGA GGGTCGATCT CGACGGGTTT TTGCCCGTTC CCGAGGTGCT TGCCTACGTG 
CCTGAGGATC GAGCACTGGC ATTTACGGTC TTTCCCATAG AGCGTTGTCA GGGGCATGGG 
GGGCCTGCTT TGCGCATGGC CATGGCCGAT CCCTGCAATC TTACCGCCAT CGATGCCCTG 
GAATTTATGA CCGGGCTGAA TGTGCAACCG GTCCTTGCCT CGGAACAGTC CATACATGCC 
GCCATTCAGC GCTGTTATGT GAATAACCCG GCGCCGGATC CGTGCGCAGA AGTGACGTTG 
GATTCCAAAA CATCCGAAAC AACGATGGTG TCCGTCGAAA AATTTAATAA ACTGGTTGAA 
CTTCTTCAGG CCAAGGGATT GTTGTCCCTG GACGAGGTTC GGATGCTTGA GCGGATATGA 

 

Protein sequence

MNHSKLKLGE LLLDAGLVSE RELKAALCYQ KNQRCLLGAS LVKLGFLSDD NLLDFLEHSL 
QLERVDLDGF LPVPEVLAYV PEDRALAFTV FPIERCQGHG GPALRMAMAD PCNLTAIDAL 
EFMTGLNVQP VLASEQSIHA AIQRCYVNNP APDPCAEVTL DSKTSETTMV SVEKFNKLVE 
LLQAKGLLSL DEVRMLERI