Gene Pcar_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1093 
Symbol 
ID3723878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1285752 
End bp1286780 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content55% 
IMG OID637750683 
Producthypothetical protein 
Protein accessionYP_356512 
Protein GI77918697 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones99 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT ACCTTCCGGA AGCAACCTCC GACATTCTGA TGTATCAAAC CGAGGACGGG 
CAGACCAAAA TCGATGTGCG TCTCGAGGAT GGAACAGTCT GGTTGCCGCA AGCTGCTTTG
GCGGAACTGT TCCAGGTGAC CAAGCAGAAT ATCAGCCTGC ATCTGAAGAA TATTTTTGCC
GAAGGCGAAT TGAACGAGAA GGCAACTGTC AAGGAATACT TGACAGTTCA AATCGAAGGT
AGACGACAAG TCAATCGAGA CGTCAAACAC TACAATCTCG ATGCCATCAT CGCGGTCGGC
TACCGGGTGC GTTCACATCG CGGCACCCAG TTTCGGCGCT GGGCCACCGA GCGGCTAAAG
GAATATCTGG TCAAAGGCTT CGTCATGGAC GACGAGCGGT TGAAAAATAT CGGCACCCCG
TTCGGCGCCG ATTATTTCGA CGAACTGCTC GAACGCATCC GCGATATCCG CGCCTCCGAG
AAACGCTTTT ACCGCAAAAT CACCGACATC TACGCCACCG CCGTGGATTA CGATTCCCGG
AGCGAACCGG CACAGACCTT TTTTCAAACC GTCCAGAACA AACTCCACTG GGCCGTTACC
GGCCACACCG CCGCCGAACT GATTGCCGAG CGAGCCGATG CAAAGAAGCC GAACATGGGA
CTTACCAGCT GGAAAGGCGC CAAGGTGCGC AAGCCGGATG TGGCAGTCGC CAAGAATTAT
ATGACCGCGG AAGAGCTGAA CGGTCTCAAC CGCATCGTTA CCATGTATCT CGATTACGCC
GAGGACCAGG CCAGACGCAA GCGTCCCATG AACATGGCCG ACTGGGCCTC CAAACTGGAT
GCCTTTTTGA GTTTCAACGA GCGCGATGTG CTCGACCATG CCGGGCATGT GCGCGCCGAA
GTGGCGAAGC AGCTTGCCCA GACAGAGTAT GACAAGTTTC ATGCACGCCG ACTGGAGGAA
GAGGCTCAAG AGGAGGATGC GTTTGAGCGG GTGGTGAAGA GGATTGAGAA GAAGGGGCAT
GGGGAATGA
 
Protein sequence
MNEYLPEATS DILMYQTEDG QTKIDVRLED GTVWLPQAAL AELFQVTKQN ISLHLKNIFA 
EGELNEKATV KEYLTVQIEG RRQVNRDVKH YNLDAIIAVG YRVRSHRGTQ FRRWATERLK
EYLVKGFVMD DERLKNIGTP FGADYFDELL ERIRDIRASE KRFYRKITDI YATAVDYDSR
SEPAQTFFQT VQNKLHWAVT GHTAAELIAE RADAKKPNMG LTSWKGAKVR KPDVAVAKNY
MTAEELNGLN RIVTMYLDYA EDQARRKRPM NMADWASKLD AFLSFNERDV LDHAGHVRAE
VAKQLAQTEY DKFHARRLEE EAQEEDAFER VVKRIEKKGH GE