| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0713 |
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| Symbol | rplE |
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| ID | 3723302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 858657 |
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| End bp | 859211 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637750304 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_356142 |
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| Protein GI | 77918327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0000209145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGCAA GATTGAAGGA AGTATATTCG ACAGAAATTG CTCCCGCCTT AGTAAAGCGG
CTGCAATTGA AAAATGTTAT GGAAGTCCCC CGAGTTGAAA AGGTTGTATT GAATATGGGC
TTGGGGGAGG CTATCCAGAA TATCAAAGTT CTGGAGTCGG CAGTAGAGGA GCTTACCCGT
ATCTGCGGGC AAAAGCCTGT TGTAACCAAG GCCAAGAAGT CCATCGCGCA ATTCAAACTG
CGCGAGGGGA TGCCTATCGG CTGCATGGTT ACGCTGCGTC GTGACAAAGC CTATGAGTTT
CTTGATCGCT TGATCAATGT TGCTCTGCCG CGTGTTCGCG ATTTTAAAGG CGTTTCCAAA
AAGGGCTTTG ATGGTCGCGG AAACTATACT CTTGGTATTC GTGAGCAGCT CATCTTCCCC
GAGATCGATC TCGAAAAAGT GGATAAGGTG AAGGGGCTCA ACGTAACCAT CGTTACCACG
GCCAAGAATG ATGAGGAAGG GTATGCACTT ATGGAAGCCA TAGGCATGCC GTTCCCGAAA
AAAGCCCAAG ACTAG
|
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| Protein sequence | MGARLKEVYS TEIAPALVKR LQLKNVMEVP RVEKVVLNMG LGEAIQNIKV LESAVEELTR
ICGQKPVVTK AKKSIAQFKL REGMPIGCMV TLRRDKAYEF LDRLINVALP RVRDFKGVSK
KGFDGRGNYT LGIREQLIFP EIDLEKVDKV KGLNVTIVTT AKNDEEGYAL MEAIGMPFPK
KAQD
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