| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0304 |
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| Symbol | csdB-2 |
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| ID | 3723352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 383714 |
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| End bp | 384859 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637749884 |
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| Product | selenocysteine lyase |
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| Protein accession | YP_355734 |
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| Protein GI | 77917919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00000158193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATC TCGATAATGC CGCGACCACC TTTCCCAAGC CGGATGCGGT CTGGGAGGCG
GTCCTTGAAT GCGGCAAGAC AGCCTGCGGT AATCCCGGCC GCAGCGGCCA TCCCCTGGCT
GCGGCAGCGG CCCGGGAGGT CTTTGCGACG CGCGAAGCTC TGGCCGAATT GTTCCATGTC
GAGGATTCAT CCCGCATCAT TTTTACCTAT AATGCCAGTA TGGCACTCAA TACGGCCATT
TACGGCTACA TGACCAACGG CGGCCATGTC GTCACCTCTT CCATGGAACA CAATTCAGTG
ATGCGTCCGT TACATACTCT GCAGCAGCAG GGGCGCATCT CTCTGACGGT TGTGCCCTGC
AGTTCAAAGG GGGAGCTCGA TCCGGACGAT GTGAAACGGG CCGTGCAAGC CGACACCCGG
CTGGTGGTGC TCACCCACGC TTCCAATGTA TGCGGTACCA TCCTGCCTGT CCGCGAGGTC
AAGCAGTTGC TGCCCGATAT ACCGTTGCTG GTCGATGCGG CGCAGACCGC GGGGGTTCTG
CCCATCGATA TCGCGGCATC CGGCATCGAC ATGCTGGCTT TTTCGGGGCA CAAGGGATTG
CTGGGGCCGA TGGGAACCGG CGGCTTGTAT GCCGCGCCGT CGCTGCGGCT CGCACCGTTG
ATGCAGGGCG GGACCGGCAG CCGCTCGGAG GATCTGGAGC AGCCCGGGTT TATGCCCGAT
GCCCTGGAGG CGGGCACGCC CAATGTTCCG GGACTCAGCG GATTGCATGC GGGGGTGCGG
TTTCTGCAGG ATACGGGGCT CGCGACGGTC AGGGCGCATG AAATGGATCT TACCCGACAG
CTGATCGACG GCATTGTCGG CCACGAAAAG ATCCGCGTTC ACGGTCTGGC GGATGCGGCA
CGGCAGACCG CTGTGGTTTC GGTCACCATC GACGGGCGGG ATCCCGGCGA CATCGCGCGG
ACTTTGGATC GGGATTTCGG CATCGCCTGC AGGGCCAGCC TGCACTGCGC CCCGGTAGCC
CACCGGACCC TCGGAACCTA CCCCCACGGG ACAGTACGAC TCTCCATGAA TTATTTCAAC
AGCCAGGACG ATGTACGGGA AGCCGTGCGG GCGCTGCACG TCATTGCGGA GCAGGGGGAA
GCATGA
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| Protein sequence | MIYLDNAATT FPKPDAVWEA VLECGKTACG NPGRSGHPLA AAAAREVFAT REALAELFHV
EDSSRIIFTY NASMALNTAI YGYMTNGGHV VTSSMEHNSV MRPLHTLQQQ GRISLTVVPC
SSKGELDPDD VKRAVQADTR LVVLTHASNV CGTILPVREV KQLLPDIPLL VDAAQTAGVL
PIDIAASGID MLAFSGHKGL LGPMGTGGLY AAPSLRLAPL MQGGTGSRSE DLEQPGFMPD
ALEAGTPNVP GLSGLHAGVR FLQDTGLATV RAHEMDLTRQ LIDGIVGHEK IRVHGLADAA
RQTAVVSVTI DGRDPGDIAR TLDRDFGIAC RASLHCAPVA HRTLGTYPHG TVRLSMNYFN
SQDDVREAVR ALHVIAEQGE A
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